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Detailed information on CNT30665165


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-101

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-79

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30299845Triticum dicoccoidesTriticum aestivum89.3682.4599.02714forward
CNT30689792Triticum dicoccoidesTriticum urartu97.563.992.81779forward
CNT30592842Triticum dicoccoidesEragrostis curvula57.5756.5892.39460forward

Expression of CNT30665165

Peptides detected in this lncRNA

>peptide 1 (71 aa)
RLNSKRRHKFRAHLFIHFTVHPNLLHRSRKFTDTTKHKYITLDHSTVATKHKTRRGHTDNPIGGHRKATDL*

>peptide 2 (39 aa)
GLTAKGGTSSGLTYSFISQFIQICCTAAESSRTQPNIST*

>peptide 3 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSSVMVLPVRVLTKICIPPLRRSTRWRVDSFWML*

>peptide 4 (63 aa)
MARHLLATTETEHQVEGGLLLDVVVSEGAAVLELLTSKDEALLVRWDALLVLDLRLHIVNGVR*

>peptide 5 (68 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICICKHKVYRNHSKALVIMKLQNIKHM*

Sequence

>CNT30665165
TAGGCTTAACAGCAAAAGGAGGCACAAGTTCAGGGCTCACTTATTCATTCATTTCACAGTTCATCCAAATCTGCTGCACCGCAGCAGAAAGTTCACGGAC
ACAACCAAACATAAGTACATAACACTAGACCACAGCACGGTAGCAACAAAGCACAAGACCAGACGAGGACACACTGACAATCCGATCGGAGGACACAGAA
AGGCAACCGACTTGTGAGCCCACAGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTC
TGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCT
TCGCCTTCACATTGTCAATGGTGTCAGATGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATACCACCCCTGAGGCG
GAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCC
GGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCA
CAAAGATCTGCATCTGCAAACATAAAGTGTACCGAAACCATAGTAAGGCACTCGTAATCATGAAACTGCAGAACATAAAGCATATGTGAACAAGAAGGT