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Detailed information on CNT30194389


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30688575Secale cerealeTriticum urartu87.187.6296.13439forward

Expression of CNT30194389

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MFAFGGCGGLTRLPGWGTCWFNDDPGGPCDPFTTGVC*

>peptide 2 (31 aa)
GVAAKGSTPKLELDGDPFPKGTNALESLTAG*

>peptide 3 (71 aa)
MFRSVGFGFTDVVIAGAWAAGVELCVGIPTVPRFTCGEAPLTGACEVPPNGLALFLPLNQSVDRFAVVEPV*

Sequence

>CNT30194389
GGAGTTGCAGCGAAAGGATCAACCCCAAAACTTGAGTTGGACGGCGATCCATTTCCTAAGGGAACCAATGCCTTGGAGTCATTAACAGCTGGTTGAGAAG
ACAGAATGTTTAGATCTGTTGGATTTGGCTTTACAGATGTCGTAATAGCCGGTGCCTGGGCTGCAGGAGTTGAACTCTGTGTTGGTATTCCCACGGTGCC
AAGGTTCACCTGTGGAGAAGCACCTCTAACTGGAGCTTGCGAAGTACCTCCCAATGGACTTGCACTTTTCTTGCCACTGAACCAATCGGTGGATAGATTT
GCCGTCGTTGAACCAGTCTGATTTAGCCCACTTAGACCACCTCCTACGGGTGGCCTTGGTGCTATTCCCTGAGCAGGGGGAATGTTTGCATTTGGAGGTT
GTGGCGGCCTAACAAGATTACCCGGTTGGGGTACTTGTTGGTTCAATGACGATCCAGGAGGGCCCTGTGATCCATTTACAACTGGAGTCTGTTGACGAGG
ACCT