Detailed information on CNT30687807


BLAST search results

BLAST vs Swiss-Prot:
sp|Q5SD42|PSBF_HUPLU, E-value = 8e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30221217Triticum urartuHordeum vulgare223.2386.9669reverse complement
CNT30234601Triticum urartuBrassica oleracea2.8120.5986.697reverse complement
CNT30439292Triticum urartuAegilops tauschii17.929.7882.2618reverse complement

Expression of CNT30687807

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MSHLPQPSCSALHYMLCLIVVVARMVANSLAPMPFTQHR*

>peptide 2 (51 aa)
MTIATYLINIHLSSALQGDIPLECLCEHSLLTTQHFICLVVFATFFMHQTI*

>peptide 3 (66 aa)
IYLRLIMLHPKVLPFQAHAKISEIQVSNLKFNSDLESKQIYIIKPNTNNISITPISLFSFNYFNPR*

>peptide 4 (70 aa)
MIPPYHLHYTYGPRVVDPSNEPSPWTTMAFPVGNAPRKARPTYGFRARSLLPIGPMVIGYSSVAFLKTTS*

>peptide 5 (74 aa)
MVHVLWILLMSHLPGLQWPFLLATHHVKLGLLMASELARFCLLALWLLVILASLFSRRLLSMTHLFIMNSSMRL*

>peptide 6 (38 aa)
MSDLGPLCYFLGIEVSSTSNRFFIKLIITCGFPASFIS*

>peptide 7 (38 aa)
MPSLRYHIRHSLRLSYLVYRLFVATSSPIFLTLTLVLI*

>peptide 8 (55 aa)
MNNRSFLFFRTTQMNLVDPFRRPSITIDRTYPIFTVRWLTIGLAVPTFFSWEGTLP

>peptide 9 (37 aa)
MVYQLRSYYLHAHSHMGHIQATKLRSKYHKSNCSSYL*

>peptide 10 (80 aa)
MPSCSEVYLSIRSLSPWFIPSFSLLSMSFVQILLVCISLICCANSLLSKAHLLSSLVLVLMLRIGLLSASILTFMRRLAR*

>peptide 11 (32 aa)
MLIAIWGTYKLLSLGQNITNPTAQVISNLESN*

>peptide 12 (31 aa)
NISQVDHATPQSSPVSSSCENIRNPSVQSQV*

>peptide 13 (31 aa)
MCGSSLSSLERCGILGSVSQCNFRWPSLSAR*

>peptide 14 (36 aa)
MVHPKVLQFQAHVKISQIQVPNIKLNSVLESKQMYH*

Sequence

>CNT30687807
AATATATCTCAGGTTGATCATGCTACACCCCAAAGTTCTCCCGTTTCAAGCTCATGCGAAAATATCAGAAATCCAAGTGTCCAATCTCAAGTTTAACTCC
GACCTAGAATCCAAGCAGATATATATCATTAAACCTAACACAAACAACATTTCTATTACTCCAATATCTTTGTTTTCTTTCAACTATTTCAATCCAAGAT
GATGTAATAGTCCATCAATTTTCACAATTCATATTATACTCATATAAATCCAATATATCTCCAATCTCTAAAGGTGTGCATCTCTAACTATGATCCAACC
TCTAAAGGTCTCAAGTTCCAATCGCTAAAGGTGTGCATCTAGTACAAATCATAACTATGATCCAACCAAGCCCACTATCATGGTTATCTAAGTCCAGTAT
AAAGCGAGCTTCCAATGGATGACTATAGATCCAAAACTTAGAAGTTATTTATCCACCAGATTTTCTTCAAGATCACAATCGTGCAAGTAAATCCATACTT
CATAAGTCCTACCCTAAAGTTCTCCAGTTTCAAGGTTATTAAAGATCTATTTATCCACCAATATAGTATCACTTCATAAGTCCTATCGTCCTACTACCAC
ATCTAAAGGAGCACAAAAACATAATAAAAGCAACATCAGCTGCTCCAACAGAGCTCATACAACTGAAATTGTCATCTATTCTAATTAATCCAAATCATCC
TCCCATGATGATCTTGTACTTGTAATATTCTTGGGGAGGGTTAGCAAAATCATCATGGTCTACCAACTACGATCGTATTATCTGCATGCTCATAGCCATA
TGGGGCACATACAAGCTACTAAGCTTAGGTCAAAATATCACAAATCCAACTGCTCAAGTTATCTCTAACCTAGAATCCAACTAGTAATATCCAAGATGAT
CCAATAGTCCACAAATACCACATTCATGCTAATCATACTATACCTATATAAATTCAATATATCTCAGATTCATCATGGTACACCCTAAAGTTCTCCAGTT
TCAAGCTCATGTCAAAATATCACAAATCCAAGTGCCCAATATCAAGCTTAACTCCGTCCTAGAATCCAAGCAAATGTATCATTGAACCTAACACAAACAA
TATTTCTATTACTCCAATATTCTTGACTTTAACTCTTGTCCTAATTTAGGAACGGCACACGTGTGCTCTGCTTGGTGTTAGCCCTCGACATTGTGACTCA
CGCAGCCACTGAAGCTTGCCAGTCTATGCCTTCCCTCCGCTACCACATCCGCCATTCTCTTCGACTCTCTTACCTTGTCTACCGACTCTTTGTGGCGACA
TCATCTCCAATATTCTTGACTTTAACTCTTGTCCTAATTTAGGAACGGCACACGGGTGCTCTGCTTGGTTCACATGTGTGGCTCTAGTCTCTCATCCTTA
GAACGATGTGGTATTCTAGGATCTGTCTCGCAATGTAACTTTAGATGGCCAAGTTTGTCTGCTAGGTAAACACGTTTAGTTACCGTATCCTCATAGCGAG
ATTGTGTCTCGGCGTACTTTCAATCTTGTTCACTCTAATATTTGGGACCTAGCTCTCTTCGCCTCGAAAGGAGGCCATCGCCACTATATTATCTTTACAA
TTATTTCTCTCGACACAAGTCAATATATTTTATGCCTTCTTGTAGTGAGGTCTATCTATCTATAAGAAGTTTGTCGCCTTGGTTCATACCCAGTTTTTCA
CTACTATCCATGTCTTTCGTGCAGATTCTGCTTGTGTGTATCTCTCTCATTTGTTGCGCAAATTCCTTGTTGAGCAAAGCACACTTGCTCAGTTCTCTTG
TCCTGGTGCTCATGCTTAGAATAGGGTTGTTGAGCGCAAGCATCCTCACCTTCATGAGGCGGCTAGCGCGTTGATGACCATAGCCACCTATCTCATCAAC
ATTCATCTTTCCTCAGCTCTACAGGGCGACATTCCTCTCGAGTGTCTTTGTGAGCATTCTCTCCTAACTACTCAACACTTCATTTGTTTGGTTGTGTTTG
CTACGTTCTTCATGCACCAAACTATTTGATCAGTCTATTGAATGTGTCTTCTTAAATTGCAGTGATAAGCACAAGGGCTACCGGTGTTGGGATCTTGTTA
GTCGTCAGATGGGTGTTCCTTGATATGTGACTTCTGATTGAGTCTCGTCCTTTCTATCCAAGACCATCCTCTCCTTGGGCCTCCCCCATTGACGATATTT
CTTCCGTCAATTTTCCTGATACACTTATCACTCATTTATTGCCCTCGCCCACCTATCCCAGTTTATCCTCACATATTACTGTTATAGACCCCACACGTCG
CCACATGCGGCTTCCCCACCTTGTTCATTACCTGAGGCTACCTCACCTCGCTCATCCATGAGGTTTCCCCGATGATTCCCCCTTATCATCTTCACTACAC
CTATGGTCCACGTGTTGTGGATCCTTCTAATGAGCCATCTCCCTGGACTACAATGGCCTTTCCTGTTGGCAACGCACCACGTAAAGCTCGGCCTACTTAT
GGCTTCCGAGCTCGCTCGCTTCTGCCTATTGGCCCTATGGTTATTGGTTATTCTAGCGTCGCTTTTCTCAAGACGACTTCTTAGTATGACGCATTTGTTC
ATCATGAATAGCAGCATGCGATTGTAGAAGAGATTATTTCTCTTGCACGCATAGGCATGTGGGATATCATTTCTCTTCCTGTTGCATGAGGTCTACATAT
ACCCACCACCTGGGTATTCTCTTCCTGATGGCATGGTTTGTCGTCTTCATCGCTCTTTTATGGCCTTAAGCAAACCCCTCGTGCCCACTTTGAGCATTTT
GTCTCAGTGGTGATTGCGGCAAGTTTTCGGCGAGTGCTCATGATCCTACACTTCTTTCCACTCTCCTTCTATATGTCGATCATCACTGCGATGACTCTAA
GTACATTGCCTTTGTGAAGGCTCATCATAGTGGGTTTCTTATGTCTGATCTTGGTCCTCTTTGCTACTTCCTAGGGATTGAGGTGTCTTCTACCTCTAAT
CGCTTCTTTATCAAGCTCATCATCACCTGCGGCTTTCCCGCCTCATTCATTTCCTGAGACTACCTCACCTGGCTTGTCCCCAGTGATTCCCCCTCATCCT
CTTCTCTACTACATTGGTCATTTGCGTGTTGTGAATTCTTTTAATGAGCCATCTCCCTCAGCCGTCTTGCTCTGCCCTCCACTATATGCTTTGCCTCATT
GTCGTCGTCGCTAGGATGGTGGCAAACTCACTGGCGCCGATGCCTTTCACGCAACATCGCTAGATCCTTCATCCTCTCAAGTTGCATGAACAACCGATCG
TTTTTATTCTTTAGAACAACTCAGATGAATTTAGTAGATCCTTTTAGGAGGCCCTCAATTACCATAGATCGAACCTATCCTATTTTTACAGTGCGATGGC
TGACTATAGGACTAGCTGTACCTACTTTTTTTTCTTGGGAGGGGACACTGCCA