Detailed information on CNT30439292


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30391997Aegilops tauschiiTriticum turgidum23.8123.4597.98494forward
CNT30687807Aegilops tauschiiTriticum urartu29.7817.982.2618reverse complement

Expression of CNT30439292

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MMKGNHWGSLMDEPGEVASSNERGGEATCDDVWGHIL*

>peptide 2 (36 aa)
MNEVGKPHVTTCGVTYCSRWSFVTRWDRWARAINER*

>peptide 3 (38 aa)
MPPFGMNRCVMIKSRLEKSGARITIVVNRRKRELESHK*

>peptide 4 (37 aa)
MISHTGISTVLFGPHSPNTLVIVSFRVFLLVSHPNTS*

>peptide 5 (42 aa)
MAKSGNYCCIEYPEVITVMKITAWIDDIPHGHLNSSIWASFP*

>peptide 6 (38 aa)
MCRCAQEQQSHAAIRDEQMRHDKKSSREKRRQNNHSGQ*

>peptide 7 (61 aa)
MQLNIKEGIPDIKPRDRPVANISHNEKCAKATGANAHCSLGHVPKESLAPLDELCNTQENH*

>peptide 8 (31 aa)
MWSIHITATTCLLKQLICSSPYIGHIFGEHA*

>peptide 9 (34 aa)
MAHQKNPEHVDDQCSREEDEGELLGKPKGTSQVR*

Sequence

>CNT30439292
AGAATATTCAGATTTTTCTATTTGTGGTTATATCTTTTGGATAAACAATAGAAGGGTAAACTGCAAAGAAGAAACATAACGACCACCAGTAGTTATATCT
TTATTTTGAATTAAACTAAAGTTGTCATGATTGCAATATTTTAGAATATTCAGATTTGTTCAAGATTTATGGTGATTATCACATTAACTCTGAAACTGAA
CTATTTGTGTCGGGCCAGAGAAGCGTAATTTCAATACAAACTGCAATTGCTTGCGCAAGAGAAATCAACTCAATACTACAATTTTCCATATGAATGTAGT
AAGAGGGGGCGTACCATTGTAAACCGATGTAGGGTGAAGGCTAGCCGCATCTTTGGCGTGTGGTCAAACCCGACAAGCTGCAACTATGTGGAGCATCCAC
ATTACTGCCACCACATGCTTGCTAAAACAGTTAATATGTTCGTCCCCGTACATCGGCCACATCTTCGGTGAGCATGCTTGATGGCAAAATCGGGAAACTA
TTGTTGTATTGAGTATCCAGAGGTGATAACCGTCATGAAAATCACTGCATGGATCGATGATATCCCACACGGGCATCTCAACAGTTCTATTTGGGCCTCA
TTCCCCTAACACGCTAGTAATTGTCTCCTTTCGTGTATTTCTCTTAGTCTCACACCCAAACACTTCATGATCTGAGAGAGGGAATGCCAACAGCCATGGC
GGCAGTGTCCCCTCCGTCCATTCATGCAACTTGAGAGGCTCTAGCGATGACACGTGAGAGGCATCGGCGTCACTAAGTTTGCCACCATCCTAGCCGCGAC
GACAATGCGATAGAGCATATAGTGGAGGGCAGAGAAAGATAGTCGAGGGAGATGGCTCATCAGAAGAATCCAGAACACGTGGATGACCAGTGTAGTAGAG
AAGAGGATGAGGGGGAATTACTAGGGAAGCCCAAGGGGACAAGCCAAGTGAGGTAGCCTCAGGTAATGAACAAGGCGGGGAAGCCGCATGTGATGACGAA
CTTGATAAAGAAGCCATTAGAGGTAGAAGAAACTTCAATCCCTAGGAAGTAGCGAAGAGGACCAAGATTAGACATAAGAAATCCACTATGATGAGCCTTC
ACAAAGGCAAATGTACTTAGAGCCATAGCCAGTGTTATCGAGATATAGAAGAAGAGTTCGACCATGAGTTGAAAGGTGGACAAGTGTAGGATCATGAGCA
TCGAAAACTAGCCGTAGTCACCATCGAGACGAAACGTTCACAAACCAGGCATGAGAGGTTTGGTTAAGGCCATAAAAAAGTGACGAAGAAGACAAACCAT
GTCATCAAGAAGAGAATACCCAGGTGGTGGCTACATGTAGACCTCATGCAACTCAACATTAAGGAAGGCATTCCTGACATCAAGCCGAGAGACAGACCAG
TGGCGAACATAAGCCACAATGAGAAGTGTGCGAAGGCCACGGGAGCAAATGCTCATTGTAGTCTTGGCCATGTTCCCAAGGAAAGCCTTGCACCACTAGA
TGAGCTTTGTAACACTCAAGAGAACCATTAGTGTATTAACATTATAGACACACTTACAAGCGATGGGACGAGCACAGGGAGGAAGAGAAATGACATCCCA
TGTGCCGATGCGCACAAGAGCAACAATCGCATGCCGCCATTCGGGATGAACAGATGCGTCATGATAAAAAGTCGTCTCGAGAAAAGCGGCGCCAGAATAA
CCATAGTGGTCAATAGGCGGAAGCGAGAGCTCGAAAGCCATAAGTAGGCTGAGCTGGAGGCGATGCATTGCCAACAGGAGAGGACATTGTAGTAGATGGA
GATGGCTCGTCAGAAGGATCCATAACACGCGGACCACAAGTGTAGTGAAGAAGATGATGAAGGGGAATCATTGGGGAAGCCTCATGGACGAGCCAGGTGA
GGTAGCCTCAAGTAATGAACGAGGTGGGGAAGCCACATGTGACGACGTGTGGGGTCACATATTGTAGTAGATGGAGCTTTGTAACACGCTGGGATAGGTG
GGCGAGGGCAATAAATGAGCGATAAGTGTATCGGGAAAATTGAGGGAAGTATCCTCAATTGGGGGGGGGGGGGGG