Detailed information on CNT30686456


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 5e-49

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-42

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30189318Triticum urartuSecale cereale79.3239.4694.87234forward
CNT30666221Triticum urartuTriticum dicoccoides84.7546.8296.4250forward

Expression of CNT30686456

Peptides detected in this lncRNA

>peptide 1 (62 aa)
TSHLLATTQAENQVEGRLLLDVVVCQSAAILKLLAGKDEALLVRGDALLVLDLRLDVVDGVR*

>peptide 2 (52 aa)
MRRCWSGGMPSLSWIFALTLSMVSDDSTSRVMVLLVRVFTKICICKYKVNPE*

Sequence

>CNT30686456
TGACCAGTCACTTACTGGCCACCACGCAGGCGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCCAGAGTGCGGCCATCCTCAAGCT
GCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACCTC
AAGGGTGATGGTCTTGCTGGTGAGGGTCTTCACAAAGATCTGCATCTGTAAATACAAAGTAAACCCAGAGTAAGGAGCAGTTTTAAGGAAACATG