Detailed information on CNT30684498


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-179

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3044330Triticum urartuPrunus dulcis80.7574.0887.31906forward
CNT30704859Triticum urartuPrunus avium80.7574.9487.53906forward

Expression of CNT30684498

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKI

>peptide 2 (56 aa)
QGSFIHSSSSKSAAAQHKVQTQPDITLDHSTVATKNKTRRGHADNHNGVHRKTTDS*

>peptide 3 (62 aa)
MARHLLATTEAEHQVKGGLLLDVVVRQSAAILKLLTSKDEALLVWWDTLLVLDLRLHIVDGV*

>peptide 4 (61 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSSVIVLPVRVFTKICIPPLRRSTRWRVDSFWML*

>peptide 5 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICIPPLRRSTRWRVDSFWML*

>peptide 6 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

Sequence

>CNT30684498
TTCAGGGCTCATTTATTCATTCAAGTTCATCCAAATCTGCTGCAGCACAGCATAAAGTTCAGACACAGCCAGATATAACGCTAGACCACAGCACGGTAGC
AACAAAGAACAAGACCAGACGAGGACACGCTGACAATCACAACGGAGTACACAGAAAGACAACCGACTCGTGAGCCCAGAGACATAAGCAGCTCCATGGC
CAGGCACTTACTGGCCACCACGGAGGCGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAAGCTGCTT
ACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGC
GTGATTGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATACCACCCCTGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG
CGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTC
AATGGTGTCCGAAGACTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATACCACCCCTGAGGCGGAGCACCAGGTGGAGG
GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCT
TGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCTGAAGACTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCC
ACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGG
CGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGG
TGAGGGTCTTCACAAAGATCTG