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Detailed information on CNT3044330


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 8e-163

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-168

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Prunus dulcisNymphaea colorata69.7548.2284.88853forward
CNT30513419Prunus dulcisJuglans regia54.6278.0488.02668forward
CNT30274489Prunus dulcisChenopodium quinoa74.974.8485.37916forward
CNT3019912Prunus dulcisCitrullus lanatus74.8254.7684.04915forward
CNT30379426Prunus dulcisManihot esculenta74.1678.3285.01907forward
CNT30526024Prunus dulcisPhaseolus vulgaris73.8368.2584.27903forward
CNT30165846Prunus dulcisPistacia vera74.1676.1584.79907forward
CNT30636081Prunus dulcisCapsicum annuum74.3349.2786.14909forward
CNT3095105Prunus dulcisSolanum tuberosum74.4178.3186.15910forward
CNT30193041Prunus dulcisSecale cereale74.0846.9786.64906forward
CNT30305252Prunus dulcisTriticum aestivum60.2686.386.3737forward
CNT30226205Prunus dulcisHordeum vulgare72.9486.4385.54892forward
CNT3089455Prunus dulcisVigna radiata73.3473.7784.28897forward
CNT30538027Prunus dulcisBrassica napus68.5244.284.73838forward
CNT30510145Prunus dulcisSolanum lycopersicum56.1748.2487.63687forward
CNT30171101Prunus dulcisTrifolium pratense74.6554.984.34913forward
CNT30242602Prunus dulcisAvena sativa74.0879.2786.2906forward
CNT30312659Prunus dulcisCamelina sativa74.5746.3284.87912forward
CNT3077383Prunus dulcisBrassica juncea74.0869.9184.44906forward
CNT30264722Prunus dulcisBrassica rapa74.0885.6383.89906forward
CNT30474278Prunus dulcisSaccharum spontaneum74.1672.2183.9907forward
CNT30608559Prunus dulcisGossypium raimondii72.6158.1984.01888forward
CNT30229013Prunus dulcisAnanas comosus74.1657.5184.23907forward
CNT30217431Prunus dulcisKalanchoe fedtschenkoi74.0866.9185.43906forward
CNT30652285Prunus dulcisRosa chinensis74.8275.1888.52915forward
CNT30716337Prunus dulcisMalus domestica golden72.8571.9187.99891forward
CNT30623044Prunus dulcisDaucus carota74.4946.285.62911forward
CNT30684498Prunus dulcisTriticum urartu74.0880.7587.31906forward
CNT30480747Prunus dulcisArabidopsis halleri74.4978.5384.19911forward
CNT30595768Prunus dulcisOryza meridionalis72.6964.6585.6889forward
CNT30410857Prunus dulcisPapaver somniferum74.1669.4584.9907forward
CNT30704859Prunus dulcisPrunus avium79.3980.3196.7971forward
CNT30643414Prunus dulcisCannabis sativa72.1283.8484.35882forward
CNT30326890Prunus dulcisAsparagus officinalis74.1673.585.01907forward
CNT30149632Prunus dulcisBrachypodium distachyon51.2765.3888.2627forward
CNT30174646Prunus dulcisVigna angularis72.6185.2284.91888forward
CNT30111662Prunus dulcisFicus carica69.1762.5785.46846forward
CNT30726149Prunus dulcisLupinus angustifolius74.4147.7985.16910forward
CNT3050995Prunus dulcisCucumis sativus74.0881.485.21906forward
CNT30114615Prunus dulcisEutrema salsugineum73.191.1384.9894forward

Expression of CNT3044330

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MVSELSTSRGDGLAGEGLDEDLHTTTQTEHQMEG*

>peptide 2 (30 aa)
MVLPVRVLTKICIPPRRRSTKWRVDSFWML*

>peptide 3 (40 aa)
MVSELSTSKVIVFPVRVFTKICIPPRRRSTKCRVDSFWML*

>peptide 4 (40 aa)
MVSELSTSRVMVFPVRVFTKICIPPRRRSTKWRVDSFWML*

>peptide 5 (55 aa)
MESGLLLDVVVSKGTAILKLLSGEDQPLLVRWDALLILNLSLNVVNGIGAFDLQG*

>peptide 6 (71 aa)
TSANDKQETICYPSSLAICKYIMQTTDLTRTNQKQRDEIITQEQIYLLNKKYQETKLDKCLPKRQRQYHET*

>peptide 7 (42 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVRVFTKIC

Sequence

>CNT3044330
ACCTCTGCAAACGATAAACAGGAAACAATATGCTACCCAAGTAGCCTTGCCATCTGCAAATACATCATGCAAACAACAGATTTAACTCGGACAAACCAGA
AGCAGAGAGATGAAATTATTACTCAAGAACAAATTTATTTATTAAACAAAAAGTACCAGGAAACCAAACTAGATAAATGCCTCCCCAAGAGGCAGAGACA
GTACCATGAAACTTGAAACTTAAAAATAAAAAACTTAAAAACATTGTTTTAAGGGAACCACAGAAACATTCATTAAAAGCAGGGTGACACCAGAGACTTC
CACTTCCTAGAAACCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGCCAAAGTACGGCCGTCCTCCAGCTGCTTC
CCTGCAAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCCGAGCTCTCGACCTCCAAAG
TGATAGTCTTTCCGGTCAGGGTCTTCACGAAGATCTGCATACCACCACGGAGACGAAGCACCAAATGTAGAGTGGACTCCTTCTGGATGTTGTAGTCAGC
AAGGGTACGGCCATCCTCCAGCTGCTTTCCTGCAAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCA
ATGGTGTCCGAGCTCTCGACCTCCAGAGTGATGGTCTTTCCCGTCAGGGTCTTCACAAAAATCTGCATACCACCACGGAGACGAAGCACCAAATGGAGAG
TGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTT
ATCTTGAATCTTAGCCTTAACGTTGTCAATGGTATCGGAGCTTTCGACCTCCAGGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATACC
ACCACGCAGACGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTACGGCCGTCCTCTAGCTGCTTTCCGGCGAAGATGAGA
CGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTATCAGATGACTCCACCTCAAGGGTGATGGTCTTGCCGG
TAAGAGTTTTCACGAAGATTTGC