Detailed information on CNT30704859


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 2e-163

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-175

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019912Prunus aviumCitrullus lanatus75.8554.8884.51917forward
CNT3044330Prunus aviumPrunus dulcis100.5899.43941216forward
CNT3095105Prunus aviumSolanum tuberosum75.6878.7486.12915forward
CNT30193041Prunus aviumSecale cereale75.4347.2886.73912forward
CNT30141533Prunus aviumLolium perenne75.5276.1586.97913forward
CNT30684498Prunus aviumTriticum urartu74.9480.7587.53906forward
CNT30595768Prunus aviumOryza meridionalis73.5364.6586.28889forward
CNT30642514Prunus aviumCannabis sativa74.7781.7484.62904forward
CNT30149632Prunus aviumBrachypodium distachyon53.166.9487.54642forward
CNT30603673Prunus aviumOryza punctata54.5166.6388.01659forward

Expression of CNT30704859

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MESGLLLDVVVSKGYGHPPAACRRRSASAGLGGYLPCLEFWP*

>peptide 2 (40 aa)
MVSELSTSKVIVFPVRVFTKICIPPRRRSTKWRVDSFWML*

>peptide 3 (40 aa)
MVSELSTSRVMVFPVRVFTKICIPPRRRSTKWRVDSFWML*

>peptide 4 (40 aa)
MVSELSTSRVMVLPVRVLTKICIPPRRRSTKWRVDSFWML*

>peptide 5 (35 aa)
MQTTDLTRTNNKHRPNYYPRTNLFIKHRVSGNQTS*

>peptide 6 (34 aa)
MPSLSWILALTLSMVSDDSTSRVMVLPVRVFTKIC

>peptide 7 (75 aa)
MESGLLLDVVVSEGTAILQLLPCKDQPLLVRWDTLLVLDLRLDIVNGVRALDLQSDGLSCQGLHKNLHTTTETKH*

Sequence

>CNT30704859
AACGATAACCAGGACACATTATGCTGCCCAAATAGCTTTACCATCCGCAAATAGATCATGCAAACAACAGATTTAACTCGAACAAACAACAAGCACAGAC
CAAATTATTACCCAAGAACAAATTTATTTATTAAACATAGAGTATCAGGAAACCAAACTAGTTGAAATGCCTCACCAAGAGGCAGAAACAGTACCACGAA
ACTTGAAAAAACAAAAACAATTAAACATAGTTTTATAGGAACCACCGAAACATTCATAACAAGCAGGGTGACAACCGAGACTTCCACTTCTTAGAAACCA
CCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCAGCCAAAGTACGGCCGTCCTCCAGCTGCTTCCCTGCAAAGATCAACC
TCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGCTCTCGACCTCCAAAGTGATAGTCTTTCCGGT
CAGGGTCTTCACGAAGATCTGCATACCACCACGGAGACGAAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCC
TCCAGCTGCTTCCCTGCAAAGATCAACCTTTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATGGTGTCCGAGCTCT
CGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACAAAAATCTGCATACCACCACGGAGACGAAGCACTAAATGGAGAGTGGACTCCTTCTGGAT
GTTGTAGTCAGCAAGGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATACCTTCCTTGTCTTGAATTTTGGC
CTTGACGTTGTCAATGGTGTCGGAGCTTTCGACCTCGAGGGTGATGGTCTTACCGGTGAGGGTCTTGACGAAGATCTGCATACCACCACGCAGACGGAGC
ACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTACGGCCGTCCTCTAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGAG
GGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGATGACTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCACGAA
GATTTGCAT