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Detailed information on CNT30681791


BLAST search results

BLAST vs Swiss-Prot:
sp|P25413|RBL_AEGCR, E-value = 9e-100

BLAST vs NONCODE:
NONORUT000577, E-value = 7e-86

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30234497Triticum urartuBrassica oleracea14.6824.3684.8886forward
CNT30258743Triticum urartuAvena sativa76.4574.5497.1448forward

Expression of CNT30681791

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MTPFASCSDNFITFASKIAPFVTSLYTGF*

Sequence

>CNT30681791
CCGAGTTTAATTGCAATCAGTTAGAAGAATAAAGAAGAATTACTGCATTTCATAACTGATTTTTTTCTCTTTTTATTTCATTTATGTTTTATTTATACCT
TCTTTATCTTTAGTTTTATCTAGTTAATCAATAGTATCTAACGGCTCGAACTCGAATTTGATCGCCTTCCATACTTCACAAGCTGCGGCTAGTTCATGAC
TCCATTTGCAAGCTGCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACAGGCTTCTAAAGCCACTCGATTAGC
TGCTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATGCAGAATCGTCCCCAAAGATTTCGGTCAGAGCTGGCATACGC
CAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCAGTCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAAT
CATCGCGCAATAAATCAACAAAACCTAAAGTCATTTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCGGAGATCGTATGTCTG