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Detailed information on CNT30234497


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3076541Brassica oleraceaBrassica juncea39.6631.5395140forward
CNT30681791Brassica oleraceaTriticum urartu24.3614.6884.8886forward

Expression of CNT30234497

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MTPFASLTDNFVTLDCKITSLVASLYNSNNIYNNTCLYQRKK*

>peptide 2 (40 aa)
MKNSFQAPLIGRVMLTILLFGVTTIAQKRGPPSKPKTCYG*

Sequence

>CNT30234497
GTGTTTGTAATTTTAAAACACATTTAGTTCATTATCAAAGATGAAAAATTCTTTTCAAGCTCCGCTTATTGGTCGTGTTATGCTCACAATTCTTCTTTTC
GGAGTAACGACGATTGCCCAGAAAAGAGGACCACCATCAAAACCAAAAACTTGTTATGGCTAGTTCATGACTCCATTTGCAAGCCTCACGGATAATTTCG
TTACCCTCGACTGCAAGATCACGTCTCTCGTTGCGAGCTTGTATAACTCAAATAATATTTATAATAATACATGCCTTTATCAAAGAAAAAAATAACAATA
TTATTAATTGTTGTTTGTTTTGTAGCATAATAAAGTGTATTAAGTTTCCGAAC