Detailed information on CNT30674467


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523122Setaria viridisSetaria italica35.5334.410097forward
CNT30222969Setaria viridisHordeum vulgare28.2127.488.3177forward
CNT30347449Setaria viridisEragrostis tef26.7425.0991.7873forward

Expression of CNT30674467

Peptides detected in this lncRNA

>peptide 1 (90 aa)
RSWRWSTRLRASSSVSPAMASPSSRTLGDSVAVDATATARRPRRGTATEDLGSEAEERVVDAMGTCSGSSGLGSEQRRREEAGDKKMRRWG

>peptide 2 (73 aa)
LLEVVDEAAGLLEREPGDGVPELQDLGGLCGGGRDSDGAAAPARDGDGGPRERGGGEGGGRHGDLLGELGPRE*

Sequence

>CNT30674467
CGCTCCTGGAGGTGGTCGACGAGGCTGCGGGCCTCCTCGAGCGTGAGCCCGGCGATGGCGTCCCCGAGCTCCAGGACCTTGGGGGACTCTGTGGCGGTGG
ACGCGACAGCGACGGCGCGGCGGCCCCGGCGCGGGACGGCGACGGAGGACCTCGGGAGCGAGGCGGAGGAGAGGGTGGTGGACGCCATGGGGACTTGCTC
GGGGAGCTCGGGCCTCGGGAGTGAGCAGCGGCGGCGGGAGGAGGCGGGGGATAAGAAGATGAGGCGATGGGGT