Detailed information on CNT30674323


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZPP0|TBB1_ELEIN, E-value = 7e-29

BLAST vs NONCODE:
NONMTRT001211, E-value = 8e-08

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30155931Setaria viridisPistacia vera37.8651.2986.79159forward
CNT3054454Setaria viridisAmborella trichopoda32.8624.6484.06138forward

Expression of CNT30674323

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MHSSAFSTNWWTERVALYGSTTVSDTFGEGKTENVSIMRSG

>peptide 2 (90 aa)
ASSSNMATKHVRNNPSKSACHRRLQPPEPHGHRSHMSFMLLSASVNSISSMPSPVYQCKKAFLLNMAVNCSLTLRNISWIEVELPMKQMS*

Sequence

>CNT30674323
ACGCTAGCAGTAGTAACATGGCAACAAAACACGTAAGGAACAACCCATCGAAATCTGCCTGCCATAGAAGGCTACAACCACCAGAGCCTCATGGTCACAG
ATCTCACATGTCGTTCATGTTGCTCTCGGCCTCAGTGAACTCCATCTCGTCCATGCCCTCGCCTGTGTACCAGTGCAAGAAAGCCTTCCTCCTGAACATG
GCTGTGAACTGCTCGCTCACCCTCCGGAACATCTCCTGGATAGAGGTTGAGTTGCCAATGAAGCAAATGTCATAGAGGGCCTCATTGTCAAGAACCATGC
ACTCATCAGCATTCTCAACCAACTGGTGGACTGAAAGAGTGGCATTGTATGGCTCAACCACGGTATCAGATACTTTCGGTGAGGGGAAAACTGAGAATGT
CAGCATCATGCGGTCAGGGT