Detailed information on CNT30155931


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMTRT001211, E-value = 1e-30

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674323Pistacia veraSetaria viridis51.2937.8686.79159forward
CNT30376989Pistacia veraArabidopsis thaliana46.4546.1585.42144forward
CNT30402401Pistacia veraBeta vulgaris29.687.7484.7892forward
CNT30441907Pistacia veraAegilops tauschii52.964.3187.8164forward
CNT3078381Pistacia veraBrassica juncea76.1388.3981.78236forward
CNT30608822Pistacia veraGossypium raimondii71.6133.1382.88222forward
CNT30623465Pistacia veraDaucus carota81.6190.3687.35253forward
CNT30721041Pistacia veraTriticum spelta35.4853.484.55110forward
CNT30364046Pistacia veraSorghum bicolor77.141.0782.85239forward
CNT30569889Pistacia veraVitis vinifera79.0351.4784.08245forward
CNT3054454Pistacia veraAmborella trichopoda46.1325.5484.62143forward
CNT30116105Pistacia veraOryza nivara48.0620.1981.21149forward

Expression of CNT30155931

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MKDSKNELTTGICELESSEADVIECFIVKNHTLISIFN*

Sequence

>CNT30155931
GGGGCATATGCTTTAGAAAGGAGAAAAAATGTGAATGAAAGACTCAAAAAATGAACTTACAACTGGGATTTGTGAGCTTGAGAGTTCGGAAGCAGATGTC
ATAGAGTGCTTCATTGTCAAGAACCATACACTCATCAGCATTTTCAACTAGCTGGTGTACAGAGAGAGTGGCATTGTAAGGTTCAACCACAGTATCAGAG
ACTTTAGGTGAGGGGAAGACTGAAAAAGTCAACATCATTCGATCAGGATATTCTTCTCTGATCTTTGATATCAGTAAGGTTCCCATTCCTGATCCAGTCC
CACCTCCAAG