Detailed information on CNT30673595


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SLQ8|PSBP_CUCSA, E-value = 3e-17

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372941Setaria viridisArabidopsis thaliana25.216.1788.1459forward
CNT30236483Setaria viridisBrassica oleracea24.796.4487.9358forward

Expression of CNT30673595

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MPSPTSLSAYTRCTPENQGKECLCDAEGAGRLLDALPGALEPPLVAGLRLADVELAVRDGGRDELAMKSVFALGFPN

>peptide 2 (52 aa)
CPAQPLYLRTHGAPLKTKEKNAYATLKELAAFSTPFLAPLNHLLSPACALQM*

Sequence

>CNT30673595
CATGCCCAGCCCAACCTCTCTATCTGCGTACACACGGTGCACCCCTGAAAACCAAGGAAAAGAATGCTTATGCGACGCTGAAGGAGCTGGCCGCCTTCTC
GACGCCCTTCCTGGCGCCCTTGAACCACCTCTTGTCGCCGGCCTGCGCCTTGCAGATGTAGAGCTTGCCGTCCGAGACGGTGGCCGTGATGAGCTGGCGA
TGAAGTCCGTGTTCGCCTTGGGCTTCCCGAACAC