Detailed information on CNT30673241


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30473984Setaria viridisSaccharum spontaneum35.579.3883.96106forward
CNT30367958Setaria viridisSorghum bicolor35.239.1987.62105forward

Expression of CNT30673241

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MGCISGAGAVSAVGYGNTRASRSVGTSGSC*

>peptide 2 (74 aa)
MQFRGRWSNSHLLLRRDGLHLRRRGSVCRGVREHPGEPLGGHQRELLNRRKGWIFRSVCLGFLLPVLEGILRTRD

Sequence

>CNT30673241
TCATCACACACAAAAGATTCATCAAGTACCTTACTACACCACTGACGCTACTATATTTGATTGATAATCGTTGATGCAATTCCGAGGCAGGTGGTCCAAC
TCTCATCTTCTACTGCGACGGGATGGGCTGCATCTCCGGCGCCGGGGCAGTGTCTGCCGTGGGGTACGGGAACACCCGGGCGAGCCGCTCGGTGGGCACC
AGCGGGAGCTGCTGAATCGAAGGAAAGGTTGGATTTTTCGCTCGGTTTGTTTGGGTTTTCTTCTTCCTGTGCTCGAGGGGATTCTTCGGACTCGTGAT