Detailed information on CNT30671722


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520490Setaria viridisSetaria italica39.4426.08100127forward
CNT3013766Setaria viridisZea mays22.368.788.8972forward

Expression of CNT30671722

Peptides detected in this lncRNA

>peptide 1 (87 aa)
NARRTNDTNRQHHHHGQTQTENDDSRSLAASHRRLLTKARSEGPWSAPAPAPRRRPGTCTRCGCRSASPPCRRTGSSLGALKKIRSW*

>peptide 2 (36 aa)
TMLDGPTTPIANTTTMDRHRQRTMTLAPWRPLTGGC*

Sequence

>CNT30671722
ACAATGCTAGACGGACCAACGACACCAATCGCCAACACCACCACCATGGACAGACACAGACAGAGAACGATGACTCTCGCTCCCTGGCGGCCTCTCACCG
GAGGCTGTTGACGAAGGCGAGGAGCGAAGGCCCTTGGTCCGCACCAGCTCCTGCACCTCGCCGGCGTCCGGGAACATGTACTCGATGCGGATGCCGTAGT
GCTTCTCCACCTTGTCGAAGAACTGGTAGCTCTCTTGGGGCTTTGAAAAAAATTCGCAGCTGGTAATATTTCTTCTCTGGAGCAAATGTGTTTTTGACTC
CTGCGTTTTTTCTGTGGCGCAG