Detailed information on CNT30671543


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553989Setaria viridisOryza glaberrima26.988.0389.6658forward
CNT30576752Setaria viridisOryza barthii26.984.2789.6658forward

Expression of CNT30671543

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MEHGWMELDQLLKPIGWRSCCSCSACRRIAPRS*

>peptide 2 (70 aa)
QASLYFCKHTLVRRYTQQSKAWNMDGWSSINCSSPLDGVAAVVALLVGVSLPDHDAAVEGEPEVVGEVGGG

Sequence

>CNT30671543
ACAGGCCTCACTTTATTTTTGCAAGCACACGCTAGTGAGGAGATACACACAGCAGAGTAAGGCATGGAACATGGATGGATGGAGCTCGATCAACTGCTCA
AGCCCATTGGATGGCGTAGCTGCTGTAGTTGCTCTGCTTGTCGGCGTATCGCTCCCAGATCATGATGCCGCCGTAGAAGGCGAACCAGAGGTAGTCGGCG
AGGTCGGTGGCGGCC