Detailed information on CNT30671265


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30364646Setaria viridisSorghum bicolor29.95.5696.7261forward
CNT30369501Setaria viridisOryza glumipatula23.539.5293.7548forward

Expression of CNT30671265

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MEVFSPPVGSSAERQGLAVPLLEALEQRVDGLAQGDQE

>peptide 2 (34 aa)
MVLKCYTFVFLVYGGVLSSCGQFSRAAGARRSTP*

>peptide 3 (46 aa)
MLYFCFSCVWRCSLLLWAVQQSGRGSPFHSLRHSSSGSMAWHRAIRN

Sequence

>CNT30671265
AACGGTAAAATATAGAGAGTATCATCAGCTAGACTGATCGTAAAACTTCACAATGGTCTTGAAATGCTATACTTTTGTTTTTCTTGTGTATGGAGGTGTT
CTCTCCTCCTGTGGGCAGTTCAGCAGAGCGGCAGGGGCTCGCCGTTCCACTCCTTGAGGCACTCGAGCAGCGGGTCGATGGCCTGGCACAGGGCGATCAG
GAAC