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Detailed information on CNT30369501


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671265Oryza glumipatulaSetaria viridis9.5223.5393.7548forward
CNT30225274Oryza glumipatulaHordeum vulgare14.4829.4495.8973forward
CNT3066836Oryza glumipatulaLeersia perrieri62.188.4284.66313forward
CNT30101950Oryza glumipatulaOryza rufipogon19.6421.7191.9299forward

Expression of CNT30369501

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MMGVWQWQWRWDLGLVDGKGLAVPLLEAVEHGVDELADVGDGETGVVHGHTDGGALEVAAVERLAAVDV

>peptide 2 (51 aa)
MGRGSPFHSLRQSSMGSMSLPMLAMARRALSMDTPMGVPWKLPPWSALPRWT

Sequence

>CNT30369501
TCACAGTTAAGCTGAAGACATTGTATTATAGGATCAAAACATTTCTATTACCACAACTTTTTAAGGATGGAATCGAGTAGCAATACTTTCACCCCAAAAT
ACAGTTTAGCGACAATATCTTAGAAAAGCCGCTTGCTTTGCCGCCATGGCTGGCAAGCTGAGCAGAGCAGCTAACACAAAGAACACGAGATCACTATAAA
CCAAACGGCAACGAACGAAGAAAATACAGGGTCTTTTTTGTCTGAAGATACACGAAGCGGTTCGTTTTCTTTTATTTTTAGTCTCCTCTCCTCCTCGATG
ATGGGTGTATGGCAATGGCAATGGCGGTGGGATCTTGGCTTAGTTGATGGGAAGGGGCTCGCCGTTCCACTCCTTGAGGCAGTCGAGCATGGGGTCGATG
AGCTTGCCGATGTTGGCGATGGCGAGACGGGCGTTGTCCATGGACACACCGATGGGGGTGCCCTGGAAGTTGCCGCCGTGGAGCGCCTTGCCGCGGTGGA
CGTC