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Detailed information on CNT30670174


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30181605Triticum dicoccoidesSecale cereale22.8448.4790.55127forward
CNT30306131Triticum dicoccoidesTriticum aestivum76.6251.0899.77426forward
CNT30680086Triticum dicoccoidesTriticum urartu53.24103.590.88296forward

Expression of CNT30670174

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MEMRTTVLVDLAPCFGACVSVFACKHTCMCLCICFCFYVLSLVDVGHANLYVMLCVFG*

>peptide 2 (56 aa)
AGRNETALDLAKFVDKGVLVKLTGGGQGMPRCSPRSGHPMPGRLWMPRTSRQAVLL*

>peptide 3 (34 aa)
MISEFNHLIKRIIECLLFKCVNWKSVNKKTKCSIG

>peptide 4 (53 aa)
MLPSLWAPDARKAVDAPNLKAGRATLAAPAPTVLNFAPGQLPQDLMLFRLVLL*

>peptide 5 (78 aa)
RGAMRRRSTWPSSSTRASWSSSPAVGKACPDAPLALGTRCQEGCGCPEPQGRPCYSSCSCPDRAQLCSWSVAAGSNVV*

Sequence

>CNT30670174
GGCGGGGCGCAATGAGACGGCGCTCGACCTGGCCAAGTTCGTCGACAAGGGCGTCCTGGTCAAGCTCACCGGCGGTGGGCAAGGCATGCCCCGATGCTCC
CCTCGCTCTGGGCACCCGATGCCAGGAAGGCTGTGGATGCCCCGAACCTCAAGGCAGGCCGTGCTACTCTAGCTGCTCCTGCCCCGACCGTGCTCAACTT
TGCTCCTGGTCAGTTGCCGCAGGATCTAATGTTGTTTAGGCTGGTGCTGCTATGACGGAAGATCAGAAGAGGCATGGAGATGCGCACCACAGTTTTAGTT
GATCTTGCACCATGTTTTGGTGCTTGTGTATCTGTTTTTGCTTGTAAGCACACTTGTATGTGCTTGTGTATCTGTTTTTGCTTCTATGTGCTAAGTTTAG
TTGATGTTGGGCATGCGAACTTGTATGTGATGTTGTGTGTATTTGGCTGAATGATTTCTGAATTTAATCATTTAATCAAGAGAATTATTGAGTGTTTGCT
GTTCAAATGTGTAAACTGGAAATCAGTGAATAAAAAGACCAAATGTTCTATTGGAC