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Detailed information on CNT30306131


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30181605Triticum aestivumSecale cereale15.2348.4790.55127forward
CNT30670174Triticum aestivumTriticum dicoccoides51.0876.6299.77426forward
CNT30680086Triticum aestivumTriticum urartu35.49103.590.88296forward

Expression of CNT30306131

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MDLPIHCAEDLLIYHFSTSTLVIMNLHAP*

>peptide 2 (50 aa)
MMYYILLYFRHLVEFGPEHFGIWLLFEINLSEPLEWVQGWICPFIVQRIF*

>peptide 3 (59 aa)
MLLSFIMQACPDAPLALGTRCQEGCGCPEPQGRPCYSSCSCPDRAQLCSWSVAAGSNVV*

>peptide 4 (58 aa)
MEMRTTVLVDLAPCFGACVSVFACKHTCMCLCICFCFYVLSLVDVGHANLYVLLCVFG*

>peptide 5 (53 aa)
MLPSLWAPDARKAVDAPNLKAGRATLAAPAPTVLNFAPGQLPQDLMLFRLVLL*

Sequence

>CNT30306131
TTAGAACTGAATTATGCTCTATTTTGTTGTAGTTGTATGCTCTTATTGCTGAATTGTTTAGTGGGTTGTTAAACTAAACTCGTCCAGTCAGTTTGCTATG
ATGTACTATATATTATTGTACTTTAGACATCTTGTAGAATTTGGGCCTGAGCACTTTGGAATTTGGTTGCTATTTGAGATTAATCTTTCCGAGCCATTAG
AGTGGGTTCAAGGATGGATCTGCCCATTCATTGTGCAGAGGATCTTCTAATTTACCACTTCTCTACTAGTACATTAGTTATCATGAACCTACATGCTCCT
TGAGGTTCCTTAACTTCACAGTCAAGTTATGACAGCAGTTTGATATTCCTTTTGCTACCACATGTCCTTTAGTCTTTAACTCTCTGATGCTGCTTTCCTT
CATCATGCAGGCATGCCCCGATGCTCCCCTCGCTCTGGGCACCCGATGCCAGGAAGGCTGTGGATGCCCCGAACCTCAAGGCAGGCCGTGCTACTCTAGC
TGCTCCTGCCCCGACCGTGCTCAACTTTGCTCCTGGTCAGTTGCCGCAGGATCTAATGTTGTTTAGGCTGGTGCTGCTATGACGGAAGATCAGAAGAGGC
ATGGAGATGCGCACCACAGTTTTAGTTGATCTTGCACCATGTTTTGGTGCTTGTGTATCTGTTTTTGCTTGTAAGCACACTTGTATGTGCTTGTGTATCT
GTTTTTGCTTCTATGTGCTAAGTTTAGTTGATGTTGGGCATGCGAACTTGTATGTGCTGTTGTGTGTATTTGGCTGAATGATTTCTGAATTTAATCATTT
AATCAAGAGAATTATTGAGTGTTTGCTGTTCAAA