Detailed information on CNT30670051


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 4e-94

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-90

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30306791Triticum dicoccoidesTriticum aestivum83.3396.0498.93655forward
CNT30400381Triticum dicoccoidesTriticum turgidum97.5895.8899.09767forward

Expression of CNT30670051

Peptides detected in this lncRNA

>peptide 1 (42 aa)
DTKYHIVELTNAKYNIHLYSSTHQYHIKHIKCIRKKQTRKHR*

>peptide 2 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSDDSTSKVIVLPVRVLTKICMPPRRRRTRWRVDSFWML*

>peptide 3 (49 aa)
MEGGLLLDVVVSQGAAILKLLTSKDEALLVRGDALLVLDLGLHVVDGVR*

>peptide 4 (33 aa)
MRRCWSGGMPSLSWILAFTLSMVSDDSTSRVMVL

>peptide 5 (29 aa)
MHHSTVETKKRPGQQTQAPLEAIPKTQDL*

>peptide 6 (36 aa)
MHQKEANKKTQITQQLQTQFRPHLFIKFTKAASQQL*

Sequence

>CNT30670051
TTGACACGAAGTACCATATAGTCGAACTAACAAATGCAAAGTACAATATTCATTTGTACAGCAGCACGCATCAGTACCATATAAAACATATCAAATGCAT
CAGAAAGAAGCAAACAAGAAAACACAGATAACTCAGCAACTGCAGACACAATTCAGGCCTCACTTATTTATCAAGTTCACCAAAGCTGCTTCACAACAGC
TTTAGTTTTCAAATACAACTGAACATAACGATGCATCACAGTACGGTAGAAACAAAGAAACGACCAGGACAACAGACACAGGCACCATTGGAGGCCATAC
CGAAGACACAAGACCTGTGAACCCGCACAGAAGCCGCTCCATTGCCAGGTACTTACTGGCCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTT
CTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATC
TTGGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACCTCCAAGGTGATAGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCATGCCTCCACGAAGGC
GGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTC
CGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTGC