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Detailed information on CNT30400381


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-102

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-88

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673590Triticum turgidumSetaria viridis57.556.7291.96460forward
CNT30191442Triticum turgidumSecale cereale8551.4491.03680forward
CNT30306791Triticum turgidumTriticum aestivum85.25100100682forward
CNT30670051Triticum turgidumTriticum dicoccoides95.8897.5899.09767forward
CNT30583253Triticum turgidumEchinochloa crusgalli58.6322.1391.9469forward

Expression of CNT30400381

Peptides detected in this lncRNA

>peptide 1 (36 aa)
VELTNAKYNIHLYSSTHQYHIKHIKCIRKKQTRKHR*

>peptide 2 (44 aa)
MRRCWSGGMPSLSWILAFTLSMVSDDSTSRVMVLPVRVLTKICIP

>peptide 3 (53 aa)
MPSLSWILAFTLSMVSDDSTSKVIVLPVRVLTKICMPPRRRRTRWRVDSFWML*

>peptide 4 (61 aa)
SRTNKCKVQYSFVQQHASVPYKTYQMHQKEANKKTQITQQLQTQFRPHLFIKFTKAASQQL*

>peptide 5 (29 aa)
MHHSTVETKKRPGQQTQAPLEAIPKTQDL*

Sequence

>CNT30400381
AGTCGAACTAACAAATGCAAAGTACAATATTCATTTGTACAGCAGCACGCATCAGTACCATATAAAACATATCAAATGCATCAGAAAGAAGCAAACAAGA
AAACACAGATAACTCAGCAACTGCAGACACAATTCAGGCCTCACTTATTTATCAAGTTCACCAAAGCTGCTTCACAACAGCTTTAGTTTTCAAATACAAC
TGAACATAACGATGCATCACAGTACGGTAGAAACAAAGAAACGACCAGGACAACAGACACAGGCACCATTGGAGGCCATACCGAAGACACAAGACCTGTG
AACCCGCACAGAAGCCGCTCCATTGCCAGGTACTTACTGGCCACCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGCC
AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGA
TGGTGTCAGATGACTCCACCTCCAAGGTGATAGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCATGCCTCCACGAAGGCGGAGGACAAGGTGGAGGGT
GGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG
TCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACAAAAATCTGCATACCAC