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Detailed information on CNT30306791


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-101

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-88

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30400381Triticum aestivumTriticum turgidum10085.25100682forward
CNT30670051Triticum aestivumTriticum dicoccoides96.0483.3398.93655forward

Expression of CNT30306791

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MRRCWSGGMPSLSWILAFTLSMVSDDSTSRVMVLPVRVLTKIC

>peptide 2 (53 aa)
MPSLSWILAFTLSMVSDDSTSKVIVLPVRVLTKICMPPRRRRTRWRVDSFWML*

>peptide 3 (62 aa)
LSNCRHNSGLTYLSSSPKLLHNSFSFQIQLNITMHHSTVETKKRPGQQTQAPLEAIPKTQDL*

>peptide 4 (29 aa)
SATADTIQASLIYQVHQSCFTTALVFKYN*

Sequence

>CNT30306791
CTCAGCAACTGCAGACACAATTCAGGCCTCACTTATTTATCAAGTTCACCAAAGCTGCTTCACAACAGCTTTAGTTTTCAAATACAACTGAACATAACGA
TGCATCACAGTACGGTAGAAACAAAGAAACGACCAGGACAACAGACACAGGCACCATTGGAGGCCATACCGAAGACACAAGACCTGTGAACCCGCACAGA
AGCCGCTCCATTGCCAGGTACTTACTGGCCACCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGCCAGGGTGCGGCCA
TCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGATG
ACTCCACCTCCAAGGTGATAGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCATGCCTCCACGAAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTG
GATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG
GCCTTCACATTGTCAATGGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACAAAAATCTGCA