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Detailed information on CNT30668825


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 3e-95

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30192020Triticum dicoccoidesSecale cereale90.9688.4794.84775forward
CNT30307544Triticum dicoccoidesTriticum aestivum47.7746.6296.31407forward

Expression of CNT30668825

Peptides detected in this lncRNA

>peptide 1 (96 aa)
MAQRQWITSSSRFLAKVARGLARERAEVEHAVGAVPGAVGGGGLGRGLAHGDAAAAERVRGSGELDRGGGERHCGGGRHCCRMEQSKLLMCGCRCY*

>peptide 2 (39 aa)
MVTRPPPSAYEAPASLIAGEESAIVVEAAIAAGWNRASC*

>peptide 3 (29 aa)
PLVFIWKMKTMHFSYRHFMFQMGAICKHL*

>peptide 4 (69 aa)
MCLLAGHKVGGEGPRVVVDGVGEVVSEVLKRTLTGDDGLHKVSKHGEHCKAAVLDLLHLELGKRLWIVS*

>peptide 5 (43 aa)
MACTKYPNMENIARRPFLISFTLSSANASGSSARPRGSKLPPG*

Sequence

>CNT30668825
GTCCACTCGTATTCATATGGAAAATGAAAACCATGCATTTCTCATATAGACATTTCATGTTCCAGATGGGCGCTATTTGTAAACATCTTTGATAGTGTAC
AACATCAACGATCAGATATTAATCATACATCCAGAGCACACATATACTCCTGAGAAGTCGATTTTCATGTGTTTACTTGCCGGGCACAAAGTTGGTGGCG
AAGGCCCACGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCAGCGAGGTTCTCAAGCGGACCCTTACCGGTGACGATGGCCTGCACAAAGTATCCAAACA
TGGAGAACATTGCAAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCAAACGCCTCTGGATCGTCAGCTAGGCCAAGGGGGTCGAAGCTGCCACC
GGGGTAGAGTGGGTCGACGATCTCTCCGAGCGGGCCACCAGCAACGCGGCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCAGACGGCCTCGCCG
AACTTGACGCCGTTGCGGGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATCACCTCGAGCTCGCGGTTCTTGG
CGAAGGTAGCTCGGGGGCTCGCCAGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGGGCCGTACCAGGGGCTGTTGGAGGCGGCGGCCTTGGGCGCGGCCT
TGCGCATGGTGACGCGGCCGCCGCCGAGCGCGTACGAGGCTCCGGCGAGCTTGATCGCGGGGGAGGAGAGCGCCATTGTGGTGGAGGCCGCCATTGCTGC
CGGATGGAACAGAGCAAGCTGCTGATGTGCGGCTGCCGCTGCTACTGATGGC