« Back to Triticum dicoccoides search


Detailed information on CNT30660752


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET002717, E-value = 1e-118

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30305086Triticum dicoccoidesTriticum aestivum15.2639.2289391reverse complement
CNT30225226Triticum dicoccoidesHordeum vulgare3.6722.3386.1794reverse complement
CNT30391596Triticum dicoccoidesTriticum turgidum7.3436.1593.09188reverse complement
CNT30720457Triticum dicoccoidesTriticum spelta24.8975.5985.58638reverse complement

Expression of CNT30660752

Peptides detected in this lncRNA

>peptide 1 (90 aa)
MLPLLMTQGKTKGEMQGVEERKKEKGGRRRCCGEALEGGGGVSEGEEEGGGGRGARWWPRSDLDRDLCGEALKQRRPLRGIGVSFLAGQRV

>peptide 2 (66 aa)
MRRGGSSRRPGPGMGQGVGERDGQEVAGGGLDRHEASSRARLRLASLARKSSRCLARPLAIMKKLN*

>peptide 3 (56 aa)
MAAQSSSSSRMMEARQRVAAPVAGEMFANSRRAQRRRRRGGHGGGSSEALACFLCS*

>peptide 4 (77 aa)
MTEMQMGKRMNAKRSPGRRRNNVRAAIRCFRRAAPALLPARGGLPDRRSTRRCAPRERGEGRTGIGRWRRSRHHPHV*

>peptide 5 (70 aa)
MVAAAARPLHASSAHDPRENERRDAGGGREEEGERREKEVLRGGTGGWGRSERGRRGRRRRSRGSVVASI*

>peptide 6 (29 aa)
MCNPRCPWCLYKPKGLVCTKTITLTSIRV*

>peptide 7 (37 aa)
MTTLLLPLGHISFSLLLVGNRPCVTLDAHGAYINQRV*

Sequence

>CNT30660752
TCCGGTAATAACCCTACGTGCTGTTTGCGGCTAGGTCTCATTATGTTCATGAGGGAGTCGCCGTAAGCCGGCTCTCCTCTTTGTGTCTAGCCCTAGATAT
TGTTTCTTGTTGCTTGTCCCTCTTTGGGGAGCCCTGCCCCTCCTTATATAAGTTGAACGGGCGGCTTACATGTAGAGTCCTATTAGGATTAGAACTAACT
TATTCTCTATTACAAGTCGGATACAAGTACGTGTCTTGCTTCCTCGTAAAGCAAATATTCCTCATGCCTTCTGTCTTAAGCCGGCCCACCATAATATGAG
TCGGCCTACTGGGCCTTGGGCCTAGTCTTCTATGTGACCCGCCGTCGGGGTCATCTGTGAGTCGTCTGACCAGTGAGTCGCCAGACCCGTGAGTCACCAG
TCCTCCGGCGGGTCATCGGTGAAGCGCCAAGTTCGGTCGGGTCATGCTTCCGGCCGGGTCATACCGCGGGGTACATCCCCGACACTAAGTGTTCCTCTGG
TATTCGGGAGTTGCATAATCTCATAGTCATAGGAACGTATAAGTCATGAAGAAAGCAATAGGAATAAACTAAACGATCATAGTGCTAAGCTAACGGGTGG
GTCTAGTCCATCACATCATTCTCTAATGATGTGATCCCGTTCATCAAATGACAACACATGTCCATGGCTAGGAAACTTAACCATTTTTGATTAACGAGCT
AGTCAAGTAGAGGCATATTAGGGACACTCTGTTTGTCTATGTATTCACACATGTACTAAGTTTTCGGTTAATACAATTCTAGCATGAATAATAAACATTT
ATCATGATATAAGGAAATATAAATGACAACTTTATTATTGCCTTTAGGGCATATTTCCTTCAGTTTACTCCTAGTTGGCAACCGACCATGTGTAACCCTA
GATGCCCATGGTGCCTATATAAACCAAAGGGTTTAGTCTGTACAAAAACAATCACACTTACTAGCATTAGGGTTTAGAACACAATATACGATCTCGAGGT
AGATCAACCTGTATTCGATACTCCATCATCAATATAATCAAGCAGGATGTAGGGTTTCACCTCTTTAAGAGGGCTCAAACCTAGATAAACACTGTCTCAC
TTGTCTCATGTTCACCATCGTTCCAAAATCCATAGCTCGAGACTCCCTATCCGAGATCTGCCGATTTTAGTACCGACAATGACCATTGTAAAAGAGATAG
CAACCAAGTAGCTCATGAACTAGTTAGATTAGCTAAGTATTCACCTCCTAGTATCTGGATGGATTCTCGCCGAATGCGGTTGTTTTCTTCCTTGTAACTG
ATGCTACTTTGCTTGTGATTTAATAAAGGAGGAACCAATTATTAAAAGTCCATCTCAATTTAGTTATATAAATACCACATTTGGCCAAACAATGGACTTC
CATATAAAACAATTAATTACGCCTCGTATACTGTTCTGAATTCGGAGAGTTCATTTGGTGCTTTCTGAAATTTCCGTCATCAGCTTTTTTGCGAAAAAGT
CCCTTCGTTTCTGAGAAATCAACCCATAGTCTTACTTAAAGTGAGTTCCTGATGAGATAACGTTTCGTTTTTTTTTTGCATAAAAACCCCTGCCACCATC
GGCCACTTATCCACTACCTGCCTCCACCGAACCGCCGGGCACGCCTCGCCAATTGCCGCCGGCGTCCACACCGCAGAAGCCAAGGAAGGGGTGATGCGTC
GCGGCGGGAGTTCGCGCCGCCCTGGCCCGGGAATGGGGCAAGGCGTTGGAGAGCGCGACGGACAGGAAGTCGCCGGAGGTGGCCTTGACCGGCACGAGGC
GAGCTCGCGGGCGCGCTTGCGGCTGGCCAGCCTAGCCCGGAAGTCCTCCCGCTGCTTGGCGAGGCCCTTGGCCATCATGAAGAAACTGAATTAGCACAAC
CAGCAGCATCCGAGGTGACGATTTACAATTGACTCAGATGACAGAGATGCAGATGGGGAAAAGAATGAACGCAAAGAGGAGTCCCGGTCGCCGTCGGAAC
AACGTTCGGGCCGCCATCAGATGCTTCAGGCGAGCGGCACCGGCGCTCCTGCCGGCAAGGGGCGGCTTGCCTGACCGGCGGTCCACGCGCAGGTGCGCCC
CACGCGAGCGAGGCGAGGGACGAACCGGGATAGGTCGATGGCGGCGCAGTCGTCATCATCCTCACGTATGATGGAGGCGAGGCAGAGGGTTGCGGCGCCG
GTCGCAGGGGAGATGTTCGCCAACAGCCGGCGAGCTCAGAGACGGCGGCGGCGCGGCGGCCATGGTGGCGGCAGCAGCGAGGCCCTTGCATGCTTCCTCT
GCTCATGACCCAAGGGAAAACGAAAGGAGAGATGCAGGGGGTGGAAGAGAGGAAGAAGGAGAAAGGAGGGAGAAGGAGGTGCTGCGGGGAGGCACTGGAG
GGTGGGGGCGGAGTGAGCGAGGGCGAAGAGGAAGGAGGAGGCGGTCGAGGGGCTCGGTGGTGGCCTCGATCTGATCTGGATCGAGACCTCTGCGGGGAGG
CCTTGAAGCAGCGGCGGCCATTGAGAGGGATTGGAGTGTCGTTCCTCGCTGGACAGAGAGTAG