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Detailed information on CNT30657116


BLAST search results

BLAST vs Swiss-Prot:
sp|P06528|ATPF_WHEAT, E-value = 2e-68

BLAST vs NONCODE:
NONCQUT006914, E-value = 1e-40

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30344054Triticum dicoccoidesEragrostis tef32.0521.3994.87117reverse complement
CNT30551824Triticum dicoccoidesOryza brachyantha47.9571.7296175forward

Expression of CNT30657116

Peptides detected in this lncRNA

>peptide 1 (32 aa)
SEFLELLVRPVGKPAVGPDSLPFVFQNKGFRF*

>peptide 2 (38 aa)
MVPLRNSSEFRIVLKILCFRLSNKSFNTPFPKKIKTPTT

Sequence

>CNT30657116
TTCAGAGTTCCTAGAGCTCCTTGTACGGCCTGTTGGAAAACCCGCTGTCGGACCTGATTCATTGCCCTTTGTTTTTCAAAATAAAGGGTTTCGTTTTTAG
ACTTTTCCAATTGTTCCAAACTAATAGAAGTAGCATTAATCAAATTTGCTTTTTCTCGTTCTATCTCAGAGTATCCATTCATTCGATACTCATCCGCTTC
TAGTTCGACTTTCTGTAATCGAATCCGAGCTTTTTCGAGTTGCTCAATGGTCCCTCTACGCAATTCTTCTGAATTTCGAATAGTACTCAAGATCCTCTGT
TTTCGATTATCTAATAAATCTTTTAACACTCCCTTTCCAAAAAAAATCAAAACACCAACCACTAC