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Detailed information on CNT30551824


BLAST search results

BLAST vs Swiss-Prot:
sp|P06528|ATPF_WHEAT, E-value = 2e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Oryza brachyanthaOryza sativa71.723.0998.29175forward
CNT30703171Oryza brachyanthaQuercus lobata69.261.4282.84169forward
CNT30271983Oryza brachyanthaChenopodium quinoa99.1820.6880.58242forward
CNT3020344Oryza brachyanthaCitrullus lanatus42.625.1484.62104forward
CNT30730672Oryza brachyanthaCorchorus capsularis31.157.5989.4776forward
CNT30632292Oryza brachyanthaVigna unguiculata54.14.482.58132forward
CNT30505351Oryza brachyanthaNicotiana attenuata69.264.8682.84169forward
CNT3095993Oryza brachyanthaSolanum tuberosum46.312.8287.61113forward
CNT30301052Oryza brachyanthaTriticum aestivum71.727.0895.43175forward
CNT30511193Oryza brachyanthaSolanum lycopersicum25.823.5688.8963forward
CNT30554216Oryza brachyanthaOryza glaberrima71.7226.8498.29175forward
CNT30145240Oryza brachyanthaMedicago truncatula23.3610.2591.2357forward
CNT30657116Oryza brachyanthaTriticum dicoccoides71.7247.9596175forward
CNT30598585Oryza brachyanthaFraxinus excelsior69.2619.8183.43169forward
CNT3017917Oryza brachyanthaZea mays99.185.8393.39242forward
CNT30205079Oryza brachyanthaHelianthus annuus69.2623.3783.43169forward
CNT30689283Oryza brachyanthaTriticum urartu99.189.5494.63242forward
CNT30344054Oryza brachyanthaEragrostis tef47.9521.3991.45117reverse complement
CNT30367017Oryza brachyanthaSorghum bicolor52.8733.0895.35129reverse complement
CNT30621081Oryza brachyanthaCajanus cajan23.365.4691.2357forward
CNT30409854Oryza brachyanthaPapaver somniferum69.2625.4981.66169forward
CNT30121210Oryza brachyanthaCitrus clementina69.264.3481.07169forward

Expression of CNT30551824

Peptides detected in this lncRNA

>peptide 1 (43 aa)
FLVLSQSIHSFDTHPLLVRLSVIEFELFRAAQWFLYAILPNFE*

>peptide 2 (45 aa)
SRSISEYPFIRYSSASSSTFCNRIRAFSSCSMVPLRNSSEFRIAL*

Sequence

>CNT30551824
TTTCTCGTTCTATCTCAGAGTATCCATTCATTCGATACTCATCCGCTTCTAGTTCGACTTTCTGTAATAGAATTCGAGCTTTTTCGAGCTGCTCAATGGT
TCCTCTACGCAATTCTTCCGAATTTCGAATAGCACTCTAGATCCTCTGTTTTCGATTATCTAATAAATCTTTTAATGAAAGTAGATTACCTTGCTATTAA
GTTTACAACTTTTATGATCTCTTCCCGAACCAAACATGAATCGT