Detailed information on CNT30650126


BLAST search results

BLAST vs Swiss-Prot:
sp|P31155|METK1_PETCR, E-value = 3e-73

BLAST vs NONCODE:
NONPOPT000585, E-value = 1e-58

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30638840Rosa chinensisCapsicum annuum33.3342.3982.32362forward
CNT30101681Rosa chinensisOryza rufipogon73.8531.382.67802forward

Expression of CNT30650126

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MVIIPGLKSKFSFTILRISLSGIFPVPYVSTKTDKGSGTPMA*

>peptide 2 (63 aa)
MILRPASTKLGCKDMAKGHQLRGFISGIAKHVTLVTSTNLLWALGKVTMDTLGNIWALLLNVD*

>peptide 3 (36 aa)
MCRRRPTRAQGHQWHRRPARWPCEQDHLLQCSWQPA*

>peptide 4 (39 aa)
MFVLVHVSQATLLSGSCSRQASSTASEIWSHSLSGCPSFT

>peptide 5 (31 aa)
MLTRTLQLSASRPTSSETNPMLRHVSRTIFS*

>peptide 6 (34 aa)
MSHRQPCCQDPAQGKHQALRQRSGRTACRGVPRSQ

Sequence

>CNT30650126
ATTGACATAACAAAAATGAAAGGAATCACAGGTTCATGTTTGAAAGCTAATAACTAATAACATAGATAGCTTCAGTGCCATCAATTTGGACAAAATTCTG
TTCATTACAGAGACACTGGTGGATGAAAATACAGTAATCCATTAAATAAAATAAGAAAAACAAATAATAGAAAAGACCAGCGATAACGTATGAAAATTAG
AAATTAGACTCTGAGAACACGCATATTATTCATCCCACTTGATGCAAGCACTGAATGACCGGCACGGCACAATCGAACAATCTCAAGACTGAGGCTTCTC
CCACTTGAGGGGCTTCACAACCTCCCAGGTGAAGTCAGGGTCATCCCTTCCGAAGTGCCCATAGGCGGCTGTCTTCAAGAATCTTCCATTGCCACCCCTC
TTGAGGTCCAGGTTGATGGTCATCATACCCGGCCTGAAGTCAAAGTTCTCCTTCACAATTTTAAGGATCTCCTTGTCAGGGATCTTTCCAGTTCCGTATG
TGTCGACGAAGACCGACAAGGGCTCAGGGACACCAATGGCATAGGAGACCTGCACGATGGCCCTGCGAGCAAGACCATTTGCTACAATGCTCTTGGCAGC
CTGCCTGACAATGTAAGCACCACTCCTGTCCACCTTGGTATCAATAATGATCTTGCGTCCGGCGAGCACCAAGCTTGGTTGCAAGGACATGGCTAAGGGG
CATCAACTCAGGGGTTTCATCAGTGGCATAGCCAAACATGTGACCCTGGTCACCAGCACCAATCTCCTCTGGGCGCTTGGTAAAGTGACCATGGACACCC
TGGGCAATATCTGGGCTCTGCTGCTCAATGTTGACTAGGACCTTGCAGTTATCAGCATCAAGACCGACATCATCAGAAACAAACCCAATGCTGCGGCATG
TGTCACGGACAATCTTCTCGTAGTCAACAGTGGCCTTGGTGGTGATCTCTCCGAACACCATTACCATGTTTGTTTTGGTACATGTCTCACAGGCAACCTT
GCTGTCAGGATCCTGCTCAAGGCAAGCATCAAGCACTGCGTCAGAGATCTGGTCGCACAGCTTGTCGGGGTGTCCCTCGTTCACAG