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Detailed information on CNT30641375


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3066802Nymphaea colorataLeersia perrieri17.1328.6989.7168forward
CNT30364747Nymphaea colorataSorghum bicolor23.6810.5382.9894forward

Expression of CNT30641375

Peptides detected in this lncRNA

>peptide 1 (30 aa)
PRSIATNVSKTSHLRSQRERKSRGVMDHHQ*

>peptide 2 (35 aa)
MSAAMAFAATMRPIASGAMVPSVPFFGSMAVAYTV*

>peptide 3 (47 aa)
TIHRHQRQQNLTSSQPEGEEEQRSDGSPPVNCTSKLSKESEPRPHGS*

Sequence

>CNT30641375
CCACGATCCATCGCCACCAACGTCAGCAAAACCTCACATCTTCGCAGCCAGAGGGAGAGGAAGAGCAGAGGAGTGATGGATCACCACCAGTGAATTGCAC
GAGCAAATTAAGCAAAGAAAGTGAACCTAGACCTCACGGGTCTTAGTTTCCTCTAGCATTCTCCGGTGGGGAGCCTCTCGTGGGTGCGGGTGATGAAGAT
GTGCTCGTAGATGAGTGCGGCGATGGCGTTTGCAGCCACGATGAGACCAATAGCCAGCGGCGCAATGGTACCGAGCGTTCCCTTCTTCGGGTCTATGGCG
GTCGCGTACACGGTGTAGACCAGCCCGAAGGTCATCACGATCTCGAACACCAACCCGTCCCATACCGACACGCTGGAGAGTGTGAGCACCGGCGTCG