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Detailed information on CNT30639465


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675011Nymphaea colorataSetaria viridis12.8152.3484.82112forward
CNT30229845Nymphaea colorataAnanas comosus12.0125.883.81105forward

Expression of CNT30639465

Peptides detected in this lncRNA

>peptide 1 (44 aa)
SNWHLDYQIHRSHLLDLFLTEIITCRQKPKEEDKHNVHYCITSR*

>peptide 2 (83 aa)
MVLVARLLPGLKTLLHTFSLRGLGVVAVGVPGVTGVGGIDSDLWNLLLLPSPPSPSDLSLSSLINGHQRNTRTQIQRNTERQQ*

Sequence

>CNT30639465
GCAGTAACTGGCATTTGGATTATCAAATTCATAGATCACATCTTCTAGATTTGTTCTTAACCGAAATCATTACATGCAGACAAAAACCCAAAGAAGAAGA
TAAGCATAACGTCCACTACTGTATCACATCCAGGTGACAAGCTTCTTCAACAGACTGTCATACACGCAGTTAACAAAAAAGAAGAAGAAAAAGAAGGATC
AACAGGAAAGATGGGAAGAGGCAACAAGCCGCTGCACGAAATCGACTGGTAGCCGGCCGGCAGATCGCCTAACGGTGCTGGCTTCGAGTCTCCCCACTGT
AAAGCCTGCCACCCAGCACACAGAAAGCAAGAAAATCAAAACCAAAATGTTCAAAAAACAACACTATATCCATAAGTCCCTAAAATTGTAGAGAGCAAAA
GAGACCAGTCATAAACGGTAGGGGAGTTGGGTTGGGGCCGGTCGAAGAGTTCGGCGCCGATGGTCTTGGTGGCGAGGTTGCTGCCGGGGTTGAAGACGCT
CCTCCACACGTTCTCCTTGCGAGGGCTCGGCGTTGTGGCCGTCGGCGTCCCTGGAGTCACCGGCGTCGGAGGCATCGACAGCGACCTCTGGAACTTGCTG
CTGCTTCCCTCTCCACCTTCCCCATCTGATTTATCTCTCTCATCGTTAATCAACGGCCACCAAAGGAACACACGCACACAAATACAGAGAAACACAGAGC
GTCAGCAATAATTTTAACCAGACAGACAGAAGATATCTCTACGCTTATCCTTTGGTAAGTGTCTTAGAAAAGTTCTAGTTAAAGATCAAAGCCTTCAGTT
CATAATAGGAGTGTAAGTTAAGGTGATCGACGTATGAAAAGACTAGAGTGAAGAAGAAGAAGAGGAAGACCTCT