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Detailed information on CNT30637534


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 6e-179

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-131

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546718Capsicum annuumIpomoea triloba69.56100.1985.47537forward
CNT30406245Capsicum annuumBeta vulgaris81.8796.9383.7632forward

Expression of CNT30637534

Peptides detected in this lncRNA

>peptide 1 (44 aa)
IFAFTLSMVSELSTSKVMVFPVNVLTKICIPPLSRSTRWRVDSF*

Sequence

>CNT30637534
ATCTTTGCTTTCACATTATCGATGGTGTCTGAACTCTCAACCTCCAAGGTGATGGTCTTTCCAGTCAATGTCTTAACGAAAATCTGCATACCACCCCTCA
GCCGCAGCACCAGATGGAGGGTTGATTCCTTCTGAATATTGTAGTCAGCAAGGGTACGACCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCTTTGCTG
ATCTGGAGGAATGCCCTCCTTGTCCTGAATTTTTGCCTTAACATTGTCAATAGTGTCTGAGCTCTCAACCTCAAGGGTAATAGTCTTTCCAGTCAAGGTT
TTCACAAAGATCTGCATGCCACCACGCAGGCGAAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCCAACT
GCTTTCCAGCGAAGATCAATCTCTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGGATTTTTGCCTTGACATTGTCAATAGTGTCAGAGCTCTCAACCTC
AAGAGTAATTGTCTTCCCAGTCAAAGTTTTCACAAAGATCTGCATACCACCACGCAGACGAAGTACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAG
TCAGCAAGAGTTCTGCCATCCTCCAACTGCTTTCCAGCAAAGATCAACCTTTGCTGATCAGGGGGAATTCCTTCCTTGTCTTGAATCTTTGCCTTAACAT
TATCGATTGTGTCAGAACTCTCAACCTCGAGAGTGATGGTCTTTCCGGTGAGGGTCTTAACAAAGATTTGCA