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Detailed information on CNT30406245


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 1e-150

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546718Beta vulgarisIpomoea triloba77.6194.484.78506forward
CNT30698491Beta vulgarisQuercus lobata92.3361.3782.39602forward
CNT30615929Beta vulgarisSesamum indicum96.4718.884.26629forward
CNT30275114Beta vulgarisChenopodium quinoa98.3191.5784.09641forward
CNT30637534Beta vulgarisCapsicum annuum96.9381.8783.7632forward
CNT3096867Beta vulgarisSolanum tuberosum99.2374.1184.39647forward
CNT30511508Beta vulgarisSolanum lycopersicum98.3149.0183.62641forward
CNT30418079Beta vulgarisPapaver somniferum93.2546.9983.39608forward
CNT30120542Beta vulgarisCitrus clementina96.9362.5782.91632forward
CNT30330398Beta vulgarisDioscorea rotundata99.2368.983.46647forward

Expression of CNT30406245

Peptides detected in this lncRNA

>peptide 1 (49 aa)
EEQDEGLIPSECYNQRGYDHLPTAYRQKSASADLEGSLPCPVSLFSHYQ*

>peptide 2 (31 aa)
MVSELSTSRVMVFPVRVLTKICMPPRRRRTR*

Sequence

>CNT30406245
CGAAGAACAAGATGAAGGGTTGATTCCTTCTGAATGTTATAATCAGCGAGGGTACGACCATCTTCCAACTGCTTACCGGCAAAAATCAGCCTCTGCTGAT
CTGGAGGGATCCCTTCCTTGTCCTGTATCTTTGTTTTCACATTATCAATAGTATCCGAGCTCTCCACCTCCAGAGTGATCGTCTTTCCAGTGAGAGTCTT
CACGAAAATCTGCATCCCACCACGCAGGCGGAGCACAAGGTGGAGGGTAGACTCCTTCTGGATATTATAATCAGCTAGAGTACGACCATCCTCGAGTTGT
TTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGTGGAATCCCTTCCTTGTCTTGAATTTTAGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAACCTCAA
GGGTAATGGTCTTCCCTGTTAGGGTTTTGACAAAGATTTGCATGCCACCACGGAGGCGGAGGACAAGATGAAGGGTTGACTCCTTCTGAATATTGTAATC
AGCAAGGGTTCGGCCATCTTCGAGTTGCTTACCGGCAAAGATCAGACGTTGCTGGTCAGGAGGAATGCCCTCCTTGTCTTGAATCTTTGCCTTAACATTG
TCAATTGTATCAGAACTCTCCACCTCGAGAGTGATCGTCTTACCAGTCAAGG