« Back to Vigna unguiculata search


Detailed information on CNT30628941


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728131Vigna unguiculataCorchorus capsularis21.2521.6485.34116forward
CNT30708285Vigna unguiculataGlycine max100.1889.0989.03547forward
CNT30120386Vigna unguiculataCitrus clementina59.1649.2478.95323forward

Expression of CNT30628941

Peptides detected in this lncRNA

>peptide 1 (41 aa)
RRKDDLFSISPIMLLLASDALLVEETKSVEVSFFASLFIND*

>peptide 2 (68 aa)
MHYLLKKLKVLKYLSLPPSSSMIDKIQLALELCELCHHPFPLLIGFLGEEEEEVVEQMVLHWQDLHLW*

Sequence

>CNT30628941
CTAGGAGGAAAGATGATCTATTCTCAATTTCCCCAATCATGTTGCTCCTAGCATCAGATGCATTACTTGTTGAAGAAACTAAAAGTGTTGAAGTATCTTT
CTTTGCCTCCCTCTTCATCAATGATTGATAAAATTCAACTAGCTCTGGAGCTCTGTGAACTTTGTCACCACCCATTCCCCCTCTTGATAGGCTTCCTGGG
GGAGGAGGAGGAGGAAGTGGTGGAGCAGATGGTACTCCATTGGCAGGATTTGCATTTGTGGTAGCAGCAGCAGCACCAGATGGCTTAGGAGGAGGCCTAG
GCACCCTAGTAGGCCTTTTCTCAATGTGAGCAAGCTTCATCTTGCTGATGGTTTGATCTTCAACATTCTTTCCATCTTCAGATTTATCATTTGGTGTGCC
AGAAACAACTGGTTTCTCCTTAATTTGAGTAAGCTTTGATGGCAAAGATATAGGATTTCCTCTTTCAGCCTTAGTCATATTCAAACCTGAATTGTCACCA
AACTTCTGCACTCTTGCTTTCTCTGCTTTTTCCTTAATCTGTTTTT