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Detailed information on CNT30628823


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 5e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30171121Vigna unguiculataTrifolium pratense79.8446.4784.31408forward
CNT3055216Vigna unguiculataAmborella trichopoda80.4345.4181.27411forward

Expression of CNT30628823

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MENMANLPFFSSFTFNSAKASGFHLGKLGQSPHREAHRQYGNPQRHPLR*

Sequence

>CNT30628823
TTTGCATCCAATATATATTTCATTGCATAAAAACTTGAAAGTCACACTCCAGTGGTAGTTTCTCACTGTTTTAATTTAATTTAATTTATTTTTTCTCACT
TTCCAGGGACAAAGTTTGTAGCATATGCCCAAGCATTGTTGTTGACTGGGTCAGCAAGGTGGTCGGCGAGGTTTTCCAGGGGTCCCTTTCCGGTAACAAT
CGCTTGAACAAAGAAACCGAACATGGAGAACATGGCTAATCTACCGTTTTTCAGTTCTTTCACCTTCAACTCAGCGAAAGCCTCTGGCTTCCACCTGGGT
AAATTGGGTCAGTCACCTCACCGAGAGGCCCACCGGCAATACGGTAACCCTCAACGGCACCCATTAAGATAACTTGAGAGGCCCAGATAGCAAGGATGCT
CTGTGCGTGGACCAGGTTTGGATTGCCCAAGTAGTCAAGCCCACCCTCACTGAATATCTGAGAGCCAGCCTTAAACCACACAGCCTCGCCGAACTTGACA
CCATTACGGGA