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Detailed information on CNT30628697


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30518558Vigna unguiculataJuglans regia61.6160.3479.6353forward
CNT30565212Vigna unguiculataActinidia chinensis31.9422.2479.78183forward

Expression of CNT30628697

Peptides detected in this lncRNA

>peptide 1 (41 aa)
RRKDDLFSISPIMLLLASDALLVEETKSVEVSFFASLFIND*

>peptide 2 (77 aa)
MHYLLKKLKVLKYLSLPPSSSMIDKIQLALELCELCHHPFPLLIGFLGEEEVEVVHLAVAEEVVEQMVLHWQDLHLW*

Sequence

>CNT30628697
CTAGGAGGAAAGATGATCTATTCTCAATTTCCCCAATCATGTTGCTCCTAGCATCAGATGCATTACTTGTTGAAGAAACTAAAAGTGTTGAAGTATCTTT
CTTTGCCTCCCTCTTCATCAATGATTGATAAAATTCAACTAGCTCTGGAGCTCTGTGAACTTTGTCACCACCCATTCCCCCTCTTGATAGGCTTCCTGGG
GGAGGAGGAGGTGGAGGTGGTCCACCTGGCGGTGGCGGAGGAAGTGGTGGAGCAGATGGTACTCCATTGGCAGGATTTGCATTTGTGGTAGCAGCAGCAG
CACCAGATGGCTTAGGAGGAGGCCTAGGCACCCTAGTAGGCCTTTTCTCAATGTGAGCAAGCTTCATCTTGCTGATGGTTTGATCTTCAACATTCTTTCC
ATCTTCAGATTTATCATTTGGTGTGCCAGAAACAACTGGTTTCTCCTTAATTTGAGTAAGCTTTGATGGCAAAGATATAGGATTTCCTCTTTCAGCCTTA
GTCATATTCAAACCTGAATTGTCACCAAACTTCTGCACTCTTGCTTTCTCTGCTTTTTCCTTAATCTGTTTTT