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Detailed information on CNT30626258


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30237729Daucus carotaBrassica oleracea16.8824.4496.64119forward
CNT30596787Daucus carotaOryza meridionalis13.7622.8895.8897forward

Expression of CNT30626258

Peptides detected in this lncRNA

>peptide 1 (42 aa)
SLVPQLLESFSFEMFLYVSRVKGECRFQKVSLFSFGLCCFSS*

>peptide 2 (54 aa)
MFLESRENAVFKRYPSSVSVYAAFLVEAAWRLKSFSFCFIVASIALHSFYIVAS*

Sequence

>CNT30626258
TTCGTTAGTTCCGCAGCTCTTGGAGAGTTTTTCATTTGAAATGTTTTTGTATGTTTCTAGAGTCAAGGGAGAATGCCGTTTTCAAAAGGTATCCCTCTTC
AGTTTCGGTTTATGCTGCTTTTCTAGTTGAAGCTGCCTGGAGATTAAAATCATTTTCATTCTGCTTTATAGTAGCAAGTATTGCATTGCATAGTTTCTAT
ATAGTTGCAAGTTGAAGCAAAAGGGAAGGATTTGCAGCTATATGAAACGAAAACATTCGTTCAAGTTATCGCTTATCGGTAGGGAAATGGCATTACTAGC
TTTTCCATATATATGAAACGAAAACATTCGTTCAAGTTATCGCTTATCGGTAGGGAAATGGCATTACTAGCTTTTCCATATATATGAAACGAAAACATTC
GTTCAAGTTATAGCTTATCGGTAGGGAAATGAGACTCTCTTCAGGGTGAGTTCAATTCATTTACTAATTTAATTTTTTTTCATTCAAATTCAAGAACAAA
AAGTGTGACCCCCCTCTAATTTTTTTGTTTTCTTTATTTTCATTTTATTTTGGGAACTTATATTGAATTTTATTGTATCTCACTTGGATCCGACACCATG
ATAAAATACTACCCTCATGATTAGACCATGTCCCTGAGATTTGATAAAAGAAAGGTGCATTAGCGGTTAATACGTTGTAATTGGATAAGTTATTAGGAAT
ATGAC