Detailed information on CNT30623499


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 1e-60

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30380492Daucus carotaManihot esculenta60.3632.2483.47236forward
CNT30525386Daucus carotaPhaseolus vulgaris55.541.0285.25217forward

Expression of CNT30623499

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MPLGPQQGLMGRNFLQGITGLRFHQVVHQ

>peptide 2 (43 aa)
MASLPFFSSFTLSSANASGSSARPNGSKLPPGYNGSTISPSGPP

>peptide 3 (73 aa)
LHQRNGSEVQLILISSSHSNSHIILQTQDQTSKTLLSPSKFTFQGQSWWQRPRHCCLQGLPSGQQGFPMALSR*

Sequence

>CNT30623499
TTGCACCAAAGGAATGGGTCTGAAGTTCAATTGATATTAATTTCTAGTAGTCATAGTAATTCACATATAATTTTACAAACTCAAGATCAAACAAGCAAGA
CACTCCTATCTCCATCTAAATTTACTTTCCAGGGACAAAGTTGGTGGCAAAGGCCCAGGCATTGTTGTTTACAGGGTCTGCCAAGTGGTCAGCAAGGTTT
TCCAATGGCCCTTTCCCGGTGACAATAGCCTGAACAAAGAACCCGAACATAGAGAACATGGCGAGTCTTCCATTCTTCAGCTCCTTCACCTTGAGCTCGG
CAAATGCCTCTGGGTCCTCAGCAAGGCCTAATGGGTCGAAACTTCCTCCAGGGTATAACGGGTCTACGATTTCACCAAGTGGTCCACCAGC