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Detailed information on CNT30525386


BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 5e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30539881Phaseolus vulgarisBrassica napus41.9729.0286.49222forward
CNT3079822Phaseolus vulgarisBrassica juncea41.9722.9186.04222forward
CNT30623499Phaseolus vulgarisDaucus carota41.0255.585.25217forward

Expression of CNT30525386

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MENMANLPFFNSLTFNSAKASGSSARPNGSKLPPG*

Sequence

>CNT30525386
CGGTATAGGAAATTTAAGACACGTTTTATGATGATAGTGCAACATTCCTTCCATTAATGTTTTTAACATAAAGATATATAATTCACATTGTTGATATATA
TTCAATGTTGGTGTGTCTCATTGTGTCATTACAATTATGATCACTTTCCAGGGACGAAGTTGGTGGCGTAGGCCCAGGCATTGTTGTTGACTGGGTCAGC
AAGGTGATCTGCAAGGTTCTCCAAAGGTCCCTTCCCAGTGACAATGGCCTGAACGAAGAAACCAAACATGGAGAACATGGCCAATCTCCCATTCTTCAAC
TCTTTAACCTTCAACTCAGCAAAGGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCGAAGCTCCCACCCGGGTAGATTGGGTGATCTGCAAGGTTCTCCA
AAGGTCCCTTTCCAGTGACAATGGCCTGAACGAAGAAACCAAACATGGAGAACATGGCCAATCTCCCATTCTTCAACTCTTTAACCTTCAACTCAGCAAA
AGCCTCTGGGTCATCAGCAAGACCCAATG