Detailed information on CNT30620080


BLAST search results

BLAST vs Swiss-Prot:
sp|O24370|LOX21_SOLTU, E-value = 2e-121

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30104618Cajanus cajanOryza rufipogon5.9721.669060forward
CNT30175788Cajanus cajanVigna angularis20.519.7780.58206forward

Expression of CNT30620080

Peptides detected in this lncRNA

>peptide 1 (82 aa)
ILFLATLGLFGKYPAKENCPKFTAAWWPEAVHAMVVRISIRSCLVLSCGHQGSSFLSAWPTLTISCHQAWSSVSDWIAPLSG*

>peptide 2 (46 aa)
MGGRVSSIASGLNVPSWVRKKSVLDPYSVVPSSCRTSFTNGNSKSW*

>peptide 3 (40 aa)
HLVPRNARPVREVPGEGELSEVHRRVVAGGSPRNGGKDFD*

>peptide 4 (30 aa)
MENFPGVKLLSIIPFAFTSASRASALISIV*

>peptide 5 (35 aa)
MCHGHKSRGLVCFSMAIPTSERLEEMKKRRRWATN*

Sequence

>CNT30620080
GCATCTTGTTCCTCGCAACGCTAGGCCTGTTCGGGAAGTACCCGGCGAAGGAGAACTGTCCGAAGTTCACCGCCGCGTGGTGGCCGGAGGCAGTCCACGC
AATGGTGGTAAGGATTTCGATTAGGTCTTGTCTTGTTTTGAGCTGCGGCCACCAGGGTTCGTCTTTCTTGTCGGCGTGGCCAACGTTGACGATCTCTTGC
CACCAGGCTTGGAGCTCTGTGTCGGATTGGATTGCTCCGTTGTCGGGGTAATAGCGGTAGATGTAATCGGTGAACCATCCTTTGAGGGCGTCCCAGAGGA
GGAGGCCGTGAGGGGCATTTTGGTCTTTGACCGCCATGCCTCGGTGGATGAGATCTGCGGGGAGGGATTGGAGGTTGAATTGCCACTGTTTGTCGTAGGC
GATTGAACTGAGCAGGATGGAGAACTTCCCCGGAGTGAAACTGCTCTCTATTATTCCGTTCGCGTTTACCAGCGCCTCACGCGCCAGCGCGTTGATCTCC
ATCGTGTAACGGAAGTGCGGGTGCAGTAGTCTGTAGATCGGGTGCATCGCGCTCAGTTGGCGGTTTGTCGCCAGAATGTAAGGCTCCGTCGCACAGTACG
CCGGTCGAGTGCCAGCAAGGTGTGAAGACTTCCTTCCACTGTGGCTTTCCGTCCATGGGTGGACGAGTAAGCTCAATAGCCAGTGGTCTTAACGTGCCTT
CGTGGGTTAGGAAGAAGAGTGTTCTTGATCCGTATAGTGTTGTGCCTTCAAGTTGTCGAACATCCTTCACTAATGGCAACAGCAAATCGTGGTAGTCCAG
CATGAAGAGTTTCTTCTGTTTAATGGCCTGCACAATTTCAGACGTCAAGTTTTAAGCAAGTGATGTGTCACGGCCATAAATCTCGGGGTCTAGTTTGCTT
TTCAATGGCCATTCCTACATCAGAGCGATTAGAAGAAATGAAAAAAAGGAGAAGGTGGGCTACAAATTAAAAGATCGAAAAGAATTATATATAGTTTAAT
TACCG