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Detailed information on CNT30175788


BLAST search results

BLAST vs Swiss-Prot:
sp|O24370|LOX21_SOLTU, E-value = 2e-147

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632051Vigna angularisVigna unguiculata35.2252.0694.82367forward
CNT3084419Vigna angularisVigna radiata31.0991.2795.37324forward
CNT30620080Vigna angularisCajanus cajan19.7720.580.58206forward

Expression of CNT30175788

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MLSITPSSSINLPLNFSNAAFTRGSCSHAGSTAAPIYSSSGE*

>peptide 2 (42 aa)
MVVTISTRSSLVFSTGHHGSSFLSPCPTVLTSSHQAWSSVSD*

>peptide 3 (49 aa)
MVARSCPRNGRHNLNEVLFGFQHRPPRFILFVAVSNGSDLFPPGLEFCV*

Sequence

>CNT30175788
TTGAAATATTTAATTAAAATATAAATTATTTAATTAAAAGAGTTATAATATAAGATAGATGTGTAAAAGAAATTGGGTTATAAAAGTATAAGCACTCTCA
TTAATTGATATTAAAGTCACGTAACTAAATTACTGAGAGGATCAACATCAAATGGAGATGCTGTAAGGAACACCCTTTCCGGTAACTCCGGCCTCCGACG
TCGGCTTCAGAAGTTCGTAGGGCACAACCCCGGCGCCGTTCCGGTTCCTCATCATCTCATCAGCATTCATGCTATCAATCACCCCTTCAAGCTCCATCAA
TCTCCCTTTGAACTTCTCAAACGCCGCCTTCACACGTGGCTCCTGCTCCCACGCCGGCTCCACTGCGGCCCCGATATACTCCTCGTCCGGCGAGTGATTC
GACAGAATGTCCAACACCGTCATCACCGTGGTGGCCTGAAACTGCGACGGAAAACACTTCAACATAGTCACCTCTGGTTTCTTCAAGAACAGCTCCCACT
CCGGATCTGAAGGGTCCTCGGAGGGCATGTTGGTACGCGCAATGGTTGGCCTGTTGGGGAAATAGCCGGCGAAGGAGAATTGTCCGAAGTTCACAGCAGC
ATGGTGGCCCGAAGTTGTCCACGCAATGGTCGTCACAATCTCAACGAGGTCCTCTTTGGTTTTCAGCACCGGCCACCACGGTTCATCCTTTTTGTCGCCG
TGTCCAACGGTTCTGACCTCTTCCCACCAGGCTTGGAGTTCTGTGTCTGATTGAATAGCGTTGGAGTCGGCGTAGTAGTGGTCGATGTATTCGGTGAACC
AGGTTTTGAAGGCCGCCCAGAGGTCGAGGCCGTCGTTGGCATAAGGGTAGTCTTGGATGGTGAGTTTGAGGCCGTGAGGGGCGGTGGGGTCCTTGGGGAG
GGATTGGAGATCAAATTGCCATTCTTGGTCATAGACGATTGAGCTTAGCAGAACGGAGTGTTTCATCGGAGTAAAACATCTCTCTATTATTCCGCCGGCG
TTTATCAAAGCCTCTCGAGCAAGCGCGTTGATCTCCATCGTG