Detailed information on CNT30104618


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30364445Oryza rufipogonSorghum bicolor40.0710.0788.29111forward
CNT30620080Oryza rufipogonCajanus cajan21.665.979060forward
CNT30556378Oryza rufipogonPanicum hallii39.7115.3287.27110forward

Expression of CNT30104618

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MQCFPGAKALSMIPLALMSIPRAWALISMVKRKCGCSSR*

Sequence

>CNT30104618
ATCAGCTGTTGGTTATTACCTCCGGATGAGATCGGCGGGTAGAGCCTCCATGTCGAAGCGCCAGAACTTGTCGTAAACCGCCGAGCTGAGCTCCATGCAG
TGCTTCCCCGGCGCGAAGGCGCTCTCGATGATTCCATTGGCGTTGATGAGCATCCCGCGCGCTTGGGCGTTGATCTCCATGGTGAAGCGGAAGTGCGGGT
GCAGCAGTCGGTAGATGGGGTGCATCTGGCTCAGCCGCCGGTTCGCCGCGATCACGTACGGCTCCACGCAGCAGTGC