Detailed information on CNT30613970


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377221Arabis alpinaArabidopsis thaliana38.5548.3690.23133forward
CNT30114533Arabis alpinaEutrema salsugineum93.0468.4484.74321forward

Expression of CNT30613970

Peptides detected in this lncRNA

>peptide 1 (58 aa)
QVMLICSTSPFLANVPASFAEGLASVNDSQENLVPVGTIFLCMPAALTCLFKNTKVEY*

>peptide 2 (38 aa)
MYACCINLFIQEHKGRILTDQGGKSYGNPRNITLAAEF*

Sequence

>CNT30613970
CCCAAGTCATGCTTATCTGTTCAACAAGCCCGTTTCTTGCAAACGTACCAGCTTCATTCGCAGAAGGACTCGCTTCAGTGAATGATTCCCAAGAGAATCT
TGTACCAGTAGGAACCATATTCCTATGTATGCCTGCTGCATTAACCTGTTTATTCAAGAACACAAAGGTAGAATACTGACTGACCAAGGAGGTAAATCAT
ATGGGAATCCACGGAACATAACTCTCGCTGCAGAATTCTGATCGGTGTTCGATAGAAACGCAGCACAAGCGGATTTAGACGTGAACACATGAGCCTGAGA
GGAGCATTCAAAAATCAGGAGGTTTTCTTTCTCGATTTAACATAA