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Detailed information on CNT30114533


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6Z6K4|BGAL4_ORYSJ, E-value = 5e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377221Eutrema salsugineumArabidopsis thaliana30.2851.6493.66142forward
CNT30613970Eutrema salsugineumArabis alpina68.4493.0484.74321forward

Expression of CNT30114533

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MQINREFVSSGGILEIDTSQDIVSKLYLLCQIPEIVSLVPSHAYLFH*

>peptide 2 (61 aa)
MLICSTSPFFANVPASFAEGAASLYDSQENLVPVGTIFLCTLGALTCFSQQHKDQFNLKRR*

Sequence

>CNT30114533
GCTAAAGTAAAAATATCCAGCAATGCAAATAAACCGTGAGTTTGTTTCCTCAGGAGGAATTTTAGAGATTGACACAAGTCAAGATATAGTTTCAAAGTTA
TACTTACTCTGTCAGATACCAGAAATAGTCAGTCTTGTCCCAAGTCATGCTTATCTGTTCCACTAGCCCGTTTTTTGCAAACGTACCAGCTTCATTCGCA
GAAGGAGCCGCTTCGTTGTATGATTCCCAAGAGAATCTGGTACCAGTTGGAACCATATTCCTGTGTACTCTTGGTGCGTTAACCTGTTTTAGTCAACAAC
ACAAAGATCAATTCAATCTTAAAAGAAGGTAGAATACTGACTGACCAAGGAGGCAAATCATATGGGAATCCACGAAACATAACTCTCGCTGCAGAATTCG
CATCGTTGTTCGATAGAAACGCAGCACAAGAGGATTTAGACCAGAACACATGAGCCTGAAAGCAACATT