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Detailed information on CNT30377221


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SCV8|BGAL4_ARATH, E-value = 3e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30613970Arabidopsis thalianaArabis alpina48.3638.5590.23133forward
CNT30114533Arabidopsis thalianaEutrema salsugineum51.6430.2893.66142forward

Expression of CNT30377221

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MSSKRCNGSISRKQSWLTKFDGFMQCFQVTIL

Sequence

>CNT30377221
CAGTGTTGTAAACCTCTGTTTTGCAATCAGGTAAAATACTGACTGACCAAGGAGGCAAATCATATGGGAATCCACGGAACAGAACTCTCGCTGCAGAGTT
CTCATCTTTGTTCGATAAAAACGCAGCACAAGATGATTTAGACCAGAACACATAAGCCTGAAAGCAACATGCAAAAGCATGAGCTCCAAGCGATGTAACG
GTAGCATCAGCAGAAAGCAAAGCTGGCTCACTAAGTTTGATGGCTTTATGCAATGCTTTCAAGTGACTATACTTT