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Detailed information on CNT30596779


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554585Oryza meridionalisOryza glaberrima1008.498.6358reverse complement
CNT30577521Oryza meridionalisOryza barthii10053.0498.6358reverse complement
CNT30117421Oryza meridionalisOryza nivara10031.3898.6358reverse complement

Expression of CNT30596779

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MYFGSIKITQFCNKCMNKRLINQFNRNRY*

Sequence

>CNT30596779
CAATCATCCACTGAATGTATTTTGGGAGCATAAAAATTACTCAGTTTTGTAACAAATGCATGAACAAACGTTTAATAAATCAATTTAATAGGAACAGGTA
CTGAATTGAGTTCCAACTGATTACATCATGTTAAGCGCTGAGTCGACCACACACCTAATGTACATTCTAACTTCTAAGTGAGATTTATTGGACAATGATA
CTGAGTTACTGGAGCAAAGCTCCCTGTTACAACTTACAACGCAAGTATGCAACTAATTATGCATTATGTTGACAACGCCTGAAGCTTAATCTTCCAAGTG
CTTTGGATGCTTGGATCCTCGTAACAGCATGGTTATAACTTGAGGCATGTCTTGTAGT