Detailed information on CNT30594934


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30462156Eragrostis curvulaSaccharum spontaneum33.4812.2684.6278reverse complement
CNT30104816Eragrostis curvulaOryza longistaminata24.8913.5889.6658reverse complement

Expression of CNT30594934

Peptides detected in this lncRNA

>peptide 1 (76 aa)
LEKPFDESILLWHVATDFCFHCKSTSCNIASLCRDISNYMVHLLFANPEMLMPGTRRSLFTDAYNELEAILQGKDIS

>peptide 2 (50 aa)
WRSPLTRASFYGMWQQIFAFIVKAHLVTLPACAETYLITWCICCLLILRC*

Sequence

>CNT30594934
TCTGGAGAAGCCCTTTGACGAGAGCATCCTTCTATGGCATGTGGCAACAGATTTTTGCTTTCATTGTAAAAGCACATCTTGTAACATTGCCAGCCTGTGC
AGAGACATATCTAATTACATGGTGCATCTGTTGTTTGCTAATCCTGAGATGTTGATGCCTGGTACCAGAAGGAGTTTGTTCACAGATGCCTACAACGAAC
TCGAGGCTATCCTCCAAGGCAAGGACATATCTT