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Detailed information on CNT30593390


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672195Eragrostis curvulaSetaria viridis52.5221.790.4125reverse complement
CNT30345512Eragrostis curvulaEragrostis tef52.5216.1998.4125reverse complement

Expression of CNT30593390

Peptides detected in this lncRNA

>peptide 1 (77 aa)
DRLLPRAYLARAPCSSTVIPQLLAIDHLTLSLTSNNGCLHHGCDLLPGDGRHPHQGGRLRRGPHHHAQDRGQAQGGDH

>peptide 2 (42 aa)
MAASTMAAISSPAMAGTPIKVGGFGEARITMRKTAAKPKAATT

>peptide 3 (33 aa)
RSLAAARLFSPRALLQHRHPTAASHRSSDTLTH*

Sequence

>CNT30593390
CCGATCGCTTGCTGCCGCGCGCCTATTTAGCCCGCGCGCCCTGCTCCAGCACCGTCATCCCACAGCTGCTAGCCATCGATCATCTGACACTCTCACTCAC
TAGCAACAATGGCTGCCTCCACCATGGCTGCGATCTCCTCCCCGGCGATGGCCGGCACCCCCATCAAGGTGGGCGGCTTCGGCGAGGCCCGCATCACCAT
GCGCAAGACCGCGGCCAAGCCCAAGGCGGCGACCACCG