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Detailed information on CNT30592160


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523938Musa acuminataSetaria italica28.4722.2484.35115forward
CNT30680513Musa acuminataTriticum urartu15.3524.0388.7162forward

Expression of CNT30592160

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSPVMWPPTASPKVTAGLRWPPEMLAAMETPTKRAKP*

>peptide 2 (96 aa)
MYSYMYILLLQADKGRHRNKTQEDDANPTRRQLYSLRIVLRRDRLVGADKDVAGDVAAHGEPESDSRVKVATGDVGRHGDADEEGQAMSEGHRNQAR

Sequence

>CNT30592160
TTAGAATTAAGGAAACATATGTTTGACCAATTTGTCCAATTTTGACTCCACAACCCACAACATACAACATTGAAACTAAGGATAGCGAATACACCTTCAC
GAAGACCGGTTATGTACTCTTATATGTACATATTATTATTACAAGCAGATAAAGGAAGACACAGAAACAAGACGCAGGAGGATGACGCCAACCCGACTCG
ACGACAGCTTTACAGCTTACGGATAGTCCTGCGCCGCGACCGCCTCGTAGGAGCCGATAAAGATGTCGCCGGTGATGTGGCCGCCCACGGCGAGCCCGAA
AGTGACAGCCGGGTTAAGGTGGCCACCGGAGATGTTGGCCGCCATGGAGACGCCGACGAAGAGGGCCAAGCCATGAGCGAGGGCCACCGCAACCAGGCCC
GCCG