Detailed information on CNT30577085


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554338Oryza barthiiOryza glaberrima75.9310099.71347forward
CNT30596829Oryza barthiiOryza meridionalis21.019.7610096reverse complement
CNT30104567Oryza barthiiOryza rufipogon18.3833.7310084reverse complement

Expression of CNT30577085

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLRNGNEGMSTIPGFSQIQFEGSKIEKGSYSSIST*

Sequence

>CNT30577085
GGTCAATGAAGTCCACATTCCAGAACCGAGGTTGCCGATCCGAGTAATTGATAGAGATGCTGCCTCTCGATTGATTGGATAAATCAAATCGAGGGGGTTA
CCGTTGTGACCACGAAAGTGAAAAATCTTCGTCCTACCAAAACCGGATCTTGAAAAGTGTTCAGTGCCCAACAAGCAACGGGTTGAGCTTCGATAAACAG
GAAACTTAAGATTAAGATGCTCCGGAATGGAAATGAGGGAATGTCCACAATACCCGGATTTAGTCAGATCCAATTCGAGGGATCTAAAATAGAAAAAGGT
AGTTACTCGTCTATCTCAACGTAAATGAACGAAGTCACTTAATGCTTCCTACTACTACTGCTCCTTCTTACTTATTTTCGTTTTTTCAGGATCTAAAGAA
GAAGAGGTTTTCTTAGCGGGCGTGAATCCGGTAGCTTCTACTTCTGTTCTGTTGTCT